Klebsiella michiganensis HKOPL1: J415_26465
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Entry
J415_26465 CDS
T03188
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
koy
Klebsiella michiganensis HKOPL1
Brite
KEGG Orthology (KO) [BR:
koy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
koy03016
]
J415_26465
Enzymes [BR:
koy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
J415_26465
Transfer RNA biogenesis [BR:
koy03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
J415_26465
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AHW90656
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All DBs
Position
5565045..5565581
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AA seq
178 aa
AA seq
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MSKPKRLFFAIELPGDVQQQIVHWRAASFPGDAGRPVAAANLHLTLAFLGEVSADKQRAL
SAMAGRIRQPGFTLTLDDAGQWLRSRVVWLGTRQPPRGVLQLANMLRAQAARSGCYQSPQ
PFHPHITLLRDARHAVPIPPPGFSWAFAVNEFVLYESSFSRGRTRYQALERYPFDKES
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccgaaaaggctgtttttcgccattgaactacccggggacgttcagcagcag
atcgtgcactggcgcgccgccagctttcccggcgatgcggggcgaccggtggcggcggct
aacctccatctgacgctggcgtttcttggcgaggtgagcgcggacaagcagcgggcgctg
tcagcgatggccggacggatccgccagccgggctttaccctgacgcttgacgatgccggg
cagtggctgcgttcgcgggtggtgtggctgggcacccgtcagccgccgcgcggggtgctg
caattagcgaatatgctgcgcgcccaggccgcccgcagcggctgctatcagagcccgcag
ccgtttcatccgcatataaccctgctgcgcgacgcgcgccacgcggtgccgattccgccg
cccggatttagctgggcgtttgcggtcaacgaatttgtgctctacgaatccagctttagc
cgcgggcgcacccgctatcaggcgctggaacgttatcccttcgacaaggaaagctga
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