Kordiimonas sp. SCSIO 12610: KFF44_01150
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Entry
KFF44_01150 CDS
T08324
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
koz
Kordiimonas sp. SCSIO 12610
Pathway
koz02020
Two-component system
koz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
koz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KFF44_01150 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KFF44_01150 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
koz03021
]
KFF44_01150 (rpoN)
Transcription machinery [BR:
koz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KFF44_01150 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
SWIB
Motif
Other DBs
NCBI-ProteinID:
UTW55531
LinkDB
All DBs
Position
complement(232510..234096)
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AA seq
528 aa
AA seq
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MALTPRLDLRQSQQLVMTPQLQQAIKLLQLSNLELADYVAEEIERNPLLENAGESASLTE
INPDNGEGGGTADDSYLREDGTGNDNNDGMIAADTSMNTAIDTTSGNDTALDTDYQDNVF
NNDAVADKAGSISDTNASGSLSYDGSSQTSSSGSFNDDRSFEQTLEESENLHDFLTRQMT
TLLKTQGDRMIAMHLIDMVDEAGYVDQENVYEIAPRLGCDQEDVEAVLVQLQKMEPSGVF
ARNLAECLAIQLAEQDRLDPIMQKFLANLDLLGKRDMAGLKKACGTDQEDLTDMIKEIRT
LNPKPGLLYSSDSVQPVVPDIFISKNKAGAWIVELNTDTLPKVLLNSHYLAELEGVTGEK
EAKTFVSDCVSNANWLVKALDQRAKTILKVATALVKKQEMFFEHGVRYMKPLILKDIAEE
IDMHESTVSRVTNNKFMSCSRGMFELKYFFTSAISSASGGDAHSAESVKYRLKELIDQED
PKKILSDDKLVALMKAEGVDIARRTVAKYREAMKIPSSVQRRRQKNMA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcacttactcccagattagacctaagacaaagccagcaactggtcatgacgccccag
ttgcaacaagcgattaagctccttcaacttagtaatctggaactagcggactatgtagcc
gaggaaattgaacgcaatcccttactggaaaacgctggcgagagtgcatccctcactgaa
ataaatcctgataacggcgagggtggtggaaccgctgatgatagttacctccgtgaagac
ggaacgggaaacgataataacgacggtatgattgccgccgataccagtatgaacacggcg
attgatacaacaagcggtaatgacaccgcgcttgacactgattatcaggataatgtcttc
aataacgatgctgttgccgataaggcaggcagtatctcggacacaaacgcatctggttca
ctatcttatgatgggtcaagccaaacaagttcatccggtagctttaatgacgaccgaagt
ttcgagcagaccctcgaagaaagtgaaaatttacatgattttctaacgcgtcagatgaca
accttattgaaaacgcaaggtgatcgcatgatcgccatgcacttgatcgatatggtggac
gaagccggatatgtcgaccaagaaaacgtctatgaaattgcgcctagacttggttgtgac
caagaggatgtcgaggctgttcttgttcaattgcagaaaatggagccatctggggtattc
gcccgtaacttggccgaatgccttgctatccagttagccgagcaagaccgattagacccg
attatgcaaaagtttctcgccaacctagacctgctcggaaaacgagacatggcgggatta
aaaaaagcatgtggtacggatcaagaagatctgactgatatgattaaagagatcagaacg
ctcaacccaaaacccgggttactctatagttctgattccgtgcaacccgttgtgcctgat
attttcatatccaagaacaaagccggcgcatggattgttgaattaaatacagatacattg
ccaaaagtacttctaaacagccactatttagctgagcttgaaggcgttacgggcgaaaaa
gaagccaaaacatttgtatctgattgtgtatctaatgctaactggcttgtgaaagcattg
gatcaacgggccaaaactatccttaaggtcgcaactgcgcttgttaaaaaacaggaaatg
ttcttcgagcatggtgttcgctatatgaaaccactgatcttaaaggatattgccgaagaa
attgatatgcacgaatcaacggtttcacgcgtgacaaataataaattcatgtcgtgctcc
agggggatgtttgaacttaaatatttcttcacctcagcgatttcttctgcgtccggcggt
gacgcccattcagcagaatctgttaaatatcggttgaaagaattgatagaccaggaagac
ccaaagaaaattttatctgatgacaagcttgtggcactcatgaaggctgaaggtgtcgat
attgcgaggcgaaccgttgcaaaataccgggaagcgatgaaaatcccatcatcggttcaa
cgccgacgtcagaaaaacatggcttaa
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