Kordiimonas sp. SCSIO 12610: KFF44_10445
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Entry
KFF44_10445 CDS
T08324
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
koz
Kordiimonas sp. SCSIO 12610
Pathway
koz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
koz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KFF44_10445 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
koz03400
]
KFF44_10445 (xth)
Enzymes [BR:
koz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
KFF44_10445 (xth)
DNA repair and recombination proteins [BR:
koz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KFF44_10445 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
UTW54238
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All DBs
Position
2239550..2240335
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AA seq
261 aa
AA seq
DB search
MKIATFNINGIKARLPRLLEWLDEFSPDVACLQEIKSIDENFPRLEIEEKGWHVETHGQK
SFNGVAFISKHPIENTLRGLPGHNGEPFLDDEQARYIEATIKGVRIASIYLPNGNPRPGP
KFDYKLEWMDRLISHAKRLLETEQPVVLAGDYNVIPHDEDCYNPAAWTEDALTQPESRAR
LRSLINLGYLDAIRQINPVGPMYSYWDFQRGAWQKDNGIRIDHLLLSAQAADRLKDSGID
RVPRGKEKPSDHTPAWIELRD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagcaaccttcaatatcaatggcatcaaggcaaggttgccaaggcttttggaa
tggctggatgaattttcacccgatgtcgcttgcctgcaagaaatcaaaagtattgatgaa
aatttcccacggctcgaaatcgaagaaaaaggctggcacgttgaaacacacggtcaaaaa
tcctttaacggtgtcgcctttatttcaaaacaccccattgaaaacactcttcgtgggctc
ccgggccataacggcgaacccttcctagacgacgagcaagcccggtatatagaggcaaca
ataaagggagttcggatcgcgtcaatttatcttccgaacggcaacccgcgcccggggcca
aagttcgattataagcttgaatggatggatcgccttatcagccatgcaaagcgcctttta
gagaccgagcaacccgttgtcctcgctggtgattataatgtaatcccccatgatgaggat
tgttataaccccgcagcatggacagaggatgccctaacccagccggaaagccgcgctcgc
ttaaggtctttgattaatctcgggtacctggatgctattaggcaaataaaccctgttggc
cctatgtatagttattgggatttccagcgcggggcatggcaaaaagacaatggcatccga
attgaccatcttcttctgtcagcgcaagcagcggaccgtctgaaagacagcggcattgac
cgcgtgccaagaggcaaggaaaaaccaagcgatcacacgcccgcctggatcgaacttaga
gactag
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