Kordiimonas sp. SCSIO 12610: KFF44_12215
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Entry
KFF44_12215 CDS
T08324
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
koz
Kordiimonas sp. SCSIO 12610
Pathway
koz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
koz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KFF44_12215 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
koz03400
]
KFF44_12215 (ruvB)
Enzymes [BR:
koz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KFF44_12215 (ruvB)
DNA repair and recombination proteins [BR:
koz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KFF44_12215 (ruvB)
RecFOR pathway proteins
KFF44_12215 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_3
AAA_22
AAA_14
nSTAND3
AAA_2
RNA_helicase
Rad17
TsaE
DUF815
AAA_17
NTPase_1
AAA_18
AAA_33
AAA_28
Bac_DnaA
AAA_24
NB-ARC
ABC_tran
IstB_IS21
Parvo_NS1
NACHT
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UTW54561
LinkDB
All DBs
Position
complement(2600135..2601184)
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AA seq
349 aa
AA seq
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MSEGPENITDRSELAGDVIDSGLRPQSLSEFIGQEQARENLSVFIEAARARAEAMDHVLF
FGPPGLGKTTLAQIVARELGVSFRATSGPVIAKAGDLAALLTNLQERDVLFIDEIHRLNP
AVEEVLYPAMEDYQLDLIIGEGPAARSVKIDLPKFTLVGATTRSGLITKPLRDRFGIPTR
LEFYTTEELTEVVRRGARLLELGMTDDGAREVAARSRGTPRIAGRLLRRVRDFALVAGRE
KVDAVAADAALTKLQVDCLGLDTMDRRYLSCIGETYSGGPVGIETLAAALSEPRDAIEDI
IEPYLMQIGMVARTPRGRVLTSDAWKHIGLNPPAGSDASAQLDLMGGKG
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaggaccagaaaatattacagatcgttcggaacttgctggtgatgtgatcgac
tctggattgaggcctcagtcgcttagtgaattcatcggtcaggagcaagcccgcgaaaac
ttgtccgttttcatcgaagcggcacgtgcgcgcgctgaagcaatggatcatgtgttgttt
tttggtcctccggggcttggtaaaaccacgctggcacagattgtggctcgagaacttggt
gttagctttagagcgacatcaggtcctgttatcgcaaaagctggtgatcttgcggccctt
ctcacaaaccttcaggaacgcgatgttttgttcattgatgaaattcaccgtttaaaccct
gcggtggaggaagtgctgtatcctgcgatggaagattatcagcttgatctgattattggc
gaaggccctgctgcacgttcagtgaagatcgatttaccaaaatttacgctggtcggcgca
acaacgcgttcgggcttgattacgaaaccactccgtgaccgatttggtattccgacacgc
cttgaattttacaccacagaagagttaaccgaagttgtacgtcggggtgcccgcttgctc
gagctcggtatgactgatgatggtgcccgtgaagtcgctgcgcgttcacggggtacgccg
cgaattgcagggcgattactgcgccgtgttcgtgattttgctttggttgctggccgtgaa
aaggtggatgcggttgcagcagatgccgctttgacaaaattacaggttgattgccttggt
cttgacacaatggacaggcgttatctgtcttgtattggtgaaacatattcaggtggacct
gtgggtattgagacgctagctgctgcactttccgagcctcgcgatgcgattgaagatatt
atcgaaccgtatttaatgcagattggtatggttgccaggacacctcgtggtcgtgttttg
acctctgatgcgtggaagcatattgggctaaacccacccgctggatcggacgcaagtgca
caacttgatcttatgggaggtaagggatga
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