Kordiimonas sp. SCSIO 12610: KFF44_14520
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Entry
KFF44_14520 CDS
T08324
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
koz
Kordiimonas sp. SCSIO 12610
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Phage_CP76
HTH_7
AAA
Bac_DnaA
HTH_50
Mg_chelatase
HTH_17
RsgA_GTPase
TIP49
AAA_3
RWP-RK
HTH_3
HTH_IclR
HTH_23
TadZ_N
Phage_CI_repr
CENP-B_N
HTH_26
TrmB
HTH_22
Xre-like-HTH
HTH_28
DUF7739
Motif
Other DBs
NCBI-ProteinID:
UTW55001
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Position
3169591..3171030
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AA seq
479 aa
AA seq
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MSDRRVLIVEDELTQLVLLESVVSKAGYIVEKAMTGREAVNRLIDRNLPEVDVVLLDLVM
PELTGIEVLEHIRPTLPNLPVVMLTSKSSINTVVKAMQAGANDFLVKPASAERIRTALAA
AMETSSFVGEIAPMQESLNENGFDGLVGNSTAMNNALSLAKKASNASIPVLIEGESGVGK
EVFANAIHDASLRAGKPFVAVNCGAIPENLVESILFGHEKGAFTGATEKRIGKFQEADGG
TLFLDEVGELPLDVQVKLLRALQEKEIDPVGSRHSIKVNIRVISATNRNLTSQVRNGAFR
EDLLYRLNVFPISLPPLRERRNDVPALTEHFLERIANMEGLPHKNISDTAMSLLSSYHWP
GNIRQLQNALFRAVILSESETLNADDFPHLSDMKSSSVAEEAFPKRSITDPSFGNIRYPE
AALNLEDTEGQFRRLNELEADIISKALKKYNGKMTEVARRLGIGRSTLYRKVAEHGLEQ
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcgtcgcgtattgatagtagaagatgaattaacacaattggttctcttggaa
tctgtagtttccaaagctggctatattgttgaaaaggccatgacagggcgtgaagccgtt
aatcggttgatagacagaaatttaccagaagtcgatgtggttttgcttgacctggttatg
cctgaactaacaggtatcgaggttttagagcatattagaccaacgcttcctaatctgcct
gttgtcatgctaacatccaaatcctctatcaatacagttgtcaaagcgatgcaagcgggc
gccaatgactttctggtcaaaccagcaagtgctgaacgcattcgaacagcattggctgct
gcaatggaaacaagctcgtttgtaggcgaaattgcgccaatgcaagaaagcttgaatgaa
aatggcttcgatggcttggttggcaatagcacggcgatgaataatgccttgtcccttgcg
aaaaaagcttcaaacgccagcatccctgttcttattgaaggcgagtctggtgttggtaag
gaagtgtttgcaaacgccatccatgacgcaagcttacgcgcagggaaaccctttgtagct
gtaaactgcggcgcaatccctgaaaatcttgtagagagtattttattcgggcatgaaaaa
ggagctttcaccggtgcaaccgaaaaacgcatcggtaaattccaagaagccgacggtgga
accttattccttgacgaagtaggcgagctgccgctggatgttcaagtgaaactactaaga
gccttgcaggaaaaggaaattgatccggttggaagccgccatagtatcaaggtgaatatc
cgtgtaatttcggctaccaaccgcaatttaaccagtcaggtgcgaaatggtgccttccgc
gaagatttattatataggctaaatgtatttccaatttcactgcccccgcttcgtgaacgc
agaaatgatgtgcctgcactaacggaacattttcttgagcgtatcgccaatatggagggc
ttaccgcacaaaaatattagcgacactgcaatgtcgttattatcgtcttaccattggccc
ggcaacataaggcagcttcaaaatgcgttattcagagctgtcatcttatcagaaagcgaa
acactaaacgctgatgatttcccgcatcttagcgatatgaaatcgagcagcgttgccgaa
gaggctttcccaaagcgctccatcactgatccaagttttggaaatattcgctacccggaa
gccgccttaaatctggaagataccgaagggcagttccgtcgtttgaatgaacttgaagca
gacatcatttcaaaggcgctaaagaaatataatggaaaaatgaccgaagttgcacgaagg
cttggcattggacgttcaacattgtatcgaaaggtagcagaacacggtttagaacagtga
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