Kordiimonas sp. SCSIO 12610: KFF44_15055
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Entry
KFF44_15055 CDS
T08324
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
koz
Kordiimonas sp. SCSIO 12610
Brite
KEGG Orthology (KO) [BR:
koz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
koz03016
]
KFF44_15055 (truB)
Enzymes [BR:
koz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KFF44_15055 (truB)
Transfer RNA biogenesis [BR:
koz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KFF44_15055 (truB)
Prokaryotic type
KFF44_15055 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DUF5374
LBP_C
Motif
Other DBs
NCBI-ProteinID:
UTW55102
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All DBs
Position
3283495..3284394
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AA seq
299 aa
AA seq
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MARKRKGDKVDGWLVIDKPLGISSAKVVAAIKHATKAQKVGHGGTLDPLASGILPIGLGE
ATKTMPYIVDATKSYEFTVKWGTETDSLDSEGAVIRENGDIPALNTIEDTLQQFVGTIQQ
TPPAYSAIKIDGKRAYALAREGKDVQLKPRPIEIQSLTIINNSIETNETTFKVQCGKGTY
VRSLARDIAYKLGTYGYITVLRRTKVGPFTLDHAISLEKLNDLSHSARAVEYVLPITTAL
DDIPAVAVTEKDAEDIKYGRSIHLATAKQGTIVLTVNDMPLAMAHSEDGQVRPLRVFNM
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaaacgtaaaggcgataaggttgatggctggctggttattgataaaccacta
ggcatctcaagcgccaaagttgtcgcagcgattaaacatgctacaaaagctcaaaaggta
gggcacgggggaacgctcgacccacttgcaagcggcatattgcctatagggctcggcgaa
gcaacaaaaactatgccctatattgttgatgctaccaaaagctatgaatttactgttaag
tggggaacagagaccgattcgctcgatagtgaaggggcagtcattcgtgaaaacggcgat
attccagcattaaatacaattgaagacacgctccaacagtttgttggtacaattcaacaa
acacccccggcctatagtgctataaaaatagatggtaagcgcgcctatgcactcgcacgc
gaaggtaaagacgtccagctaaagccaagacccattgaaattcaatcacttaccattata
aataacagcatagaaacaaatgagaccaccttcaaggttcaatgcggaaaaggtacatat
gtgcgctcactcgcgcgcgatatagcctacaaacttggcacttatggctacatcaccgtg
ctacgccggacaaaagtaggaccctttaccctcgatcatgcgatttcactggaaaaacta
aacgacttaagccatagtgcgcgcgctgtggaatatgtacttccaataacgacagcgctg
gacgacatcccggcggttgccgttacggaaaaggatgcagaagacatcaaatatggtcgc
tccatccaccttgccacagccaagcagggcacgatagtgctaacagtgaatgacatgcct
cttgcgatggcccattccgaagacgggcaagttcgccccctgcgggtcttcaatatgtaa
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