Kordiimonas sp. SCSIO 12610: KFF44_15065
Help
Entry
KFF44_15065 CDS
T08324
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
koz
Kordiimonas sp. SCSIO 12610
Pathway
koz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
koz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KFF44_15065 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
koz03019
]
KFF44_15065 (pnp)
03016 Transfer RNA biogenesis [BR:
koz03016
]
KFF44_15065 (pnp)
Enzymes [BR:
koz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KFF44_15065 (pnp)
Messenger RNA biogenesis [BR:
koz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KFF44_15065 (pnp)
Transfer RNA biogenesis [BR:
koz03016
]
Prokaryotic type
tRNA degradation factors
KFF44_15065 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
UTW55104
LinkDB
All DBs
Position
3284922..3287099
Genome browser
AA seq
725 aa
AA seq
DB search
MFDIHKKEIEWGGRTLTLETGHIARQADGAVMATYGDTTVLCTVVGARSVKPGQDFFPLT
VNYTEKYYAAGKIPGGFFKREGRPSEKETLISRLIDRPIRPLFPDGFKNEVQVICTVVSH
DLENDADIVAMIGASAALTLSGIPFLGPIGAAKVGYKDGEYILNPTIEQIAESDLELSVA
GTHDAVLMVESEAKELSEDVMLGAVMFGHDEMQAVINAIIDLAEVAAKDPWELPEGPDFS
ATKAKIADIAEADLRDAYAITVKQDRSNRIAEVKEKVFAELESDIEENDDLSTTVVGDLI
KKLESAIVRGNILSTSKRIDGRSLDQVRPIVSEVGSLPRSHGSSLFTRGETQALVVATLG
TAEDEQIIDNLEGSYRSNFMLHYNFPPFSVGECGRVGFTGRREIGHGKLAWRAVNAVLPT
KDDFPYTVRLVSEITESNGSSSMATVCGSSLAMMDAGVPISRPVSGIAMGLIKEGDDFAV
LSDILGDEDHLGDMDFKVAGTSEGITALQMDIKITGITREIMQTALAQAGGGRAHILDEM
NKALTGARTELSAHAPRIESFKIPSDKIREVIGTGGKVIREIVEKTGAKVNIDDDGTINI
ASSDGAQIEAAKDWIMGIVAEPEVGVIYKGKVVRIMDFGAFVNFMGSRDGLVHISELVEE
RVEKVTDVVKEGDEVYVKCLEIDGRGKVRLSMRVVDQETGEEDPEARPPKAGPSGGGKGK
GKPRD
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatacataaaaaagaaatagaatggggcggtcgtacgctcactttggaaaca
ggccacattgcaagacaagctgatggcgctgtaatggcaacatacggcgacacaactgtt
ttatgtacagttgttggcgcacgctcagtgaagcctggccaagactttttcccattgact
gtaaactatacagaaaaatattacgcagcaggtaagattccaggtggtttcttcaaacgt
gaaggccgcccaagcgaaaaagaaacactaatctcacgcttgattgaccgtccaatccgc
cctctttttccagacgggtttaagaacgaagttcaagtcatttgtacagttgtaagccat
gatcttgaaaacgatgctgacatcgttgcaatgatcggtgcgtcagcagcccttacactt
tcaggcattcctttcttagggccgattggggctgccaaagtgggttacaaagacggtgaa
tatatcctaaacccgactattgagcaaattgctgaaagcgatcttgagctttctgttgct
ggtacacacgatgccgttcttatggtggaatcagaagcgaaagagctttctgaagacgtg
atgctcggtgctgtgatgttcggccatgatgaaatgcaggctgtcatcaacgcaatcatt
gaccttgcggaagttgcagcgaaagatccatgggaacttccagaaggcccagacttcagt
gctacaaaagcaaaaatcgctgatatcgccgaggctgaccttcgcgatgcatatgctatt
acagtcaagcaagatcgctcaaaccgtattgcggaagtgaaagaaaaagttttcgctgag
ctagagagcgatattgaagaaaacgacgatctaagcactacagttgttggtgaccttatc
aagaaacttgagagcgcaatcgttcgcggaaatattctttccacaagcaagcgtatcgat
ggccgtagccttgatcaggttcgtccgatcgtttcagaggttggttcactgccacgttcg
cacggctcttcgcttttcacccgcggtgaaacgcaagcgcttgttgttgcaacgcttggt
acagctgaagacgagcaaatcatcgataatttggaaggcagctaccgttccaactttatg
ctgcattataatttcccaccgttttcagtgggtgaatgcggacgtgttggctttacaggt
cgccgcgaaatcggccacggcaagcttgcatggcgcgctgtgaacgctgttctaccaacg
aaagatgatttcccatatacagttcgacttgtatcagaaatcaccgaatcaaacggttcg
tcatcaatggctacagtatgtggttcatcgctcgccatgatggatgctggtgttccgatc
agccgcccggtttcaggcattgcaatgggtcttatcaaggaaggcgacgatttcgctgtt
ctttctgatatcctcggtgacgaagaccacctcggcgatatggactttaaagttgctggt
acatcagagggtatcactgcccttcaaatggacattaagatcactggtattacccgtgag
attatgcaaactgcccttgcgcaagcaggtggtggtcgcgcgcacattctggacgaaatg
aacaaagcgcttacaggtgcgcgcaccgaattgtctgctcatgcaccgcgcatcgaaagc
tttaaaattccatctgacaaaatccgtgaagttatcggaacgggcggtaaagttatccgt
gaaatcgttgagaaaacgggtgctaaagttaatatcgacgatgatggcactatcaatatt
gcgtcaagcgatggcgctcaaatcgaggctgctaaagactggatcatgggcattgttgca
gaaccagaagttggtgtgatctacaaaggtaaagtcgttcgtatcatggactttggtgcc
tttgtgaacttcatgggatcacgtgatggccttgtgcatatttcagagcttgttgaagag
cgcgtcgaaaaagttaccgatgtggtcaaggaaggcgatgaagtttacgtcaaatgcctg
gaaatcgacggccgtggtaaggttcgcctttctatgcgcgttgttgatcaggaaactggc
gaagaagatccagaagcacgcccaccgaaggctggcccttctggcggcggtaaaggtaaa
ggcaaacctcgcgattaa
DBGET
integrated database retrieval system
