Klebsiella pneumoniae 30660/NJST258_1: KPNJ1_00582
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Entry
KPNJ1_00582 CDS
T03176
Name
(GenBank) ATP-dependent RNA helicase dbpA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kpa
Klebsiella pneumoniae 30660/NJST258_1
Pathway
kpa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KPNJ1_00582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpa03019
]
KPNJ1_00582
03009 Ribosome biogenesis [BR:
kpa03009
]
KPNJ1_00582
Enzymes [BR:
kpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KPNJ1_00582
Messenger RNA biogenesis [BR:
kpa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KPNJ1_00582
Ribosome biogenesis [BR:
kpa03009
]
Prokaryotic type
rRNA helicases
KPNJ1_00582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHM82988
UniProt:
A0A0E1CCM2
LinkDB
All DBs
Position
571042..573021
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AA seq
659 aa
AA seq
DB search
MSYVDWPPLILRHTYYMAEFETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLDGR
DVLGMAQTGSGKTAAFSLPLLNNIDPELRAPQILVLAPTRELAVQVAEAMTEFSKHMRGV
NVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRM
GFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSY
WTAYGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALR
EQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGR
ALLFVENRERRLLRNIERTMKLTIPEVELPNAELLSKRRLEKFAAKVQQQLESSDLDQYR
ALLAKIQPTAEGEELDVETLAAALLKMAQGERSLIVPPDAPMRPRREFRDRDDRFDRRGD
RNDRGPRGDREDRPKRERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNI
KLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRTERRGGGERREGGRGF
GGERREGGRGFGGERREGGRGEGRRFSGERREGRAPRRDDASAPRRDDSAGRRRFGGDA
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagttatgtagactggccgccattaattttgaggcacacgtactacatggctgaattc
gaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcgctcaccgatctg
ggttacgaaaaaccatctccgatccaggctgagtgcattccgcatctgctggacggccgc
gacgttctgggtatggcccagaccggtagcggtaaaaccgcagcattctctttaccgctg
ctgaacaacatcgatcctgagctgagagcaccgcagattctggtgctggcgccgacccgc
gagctggcggtacaggttgctgaagcaatgacggaattctctaaacatatgcgcggcgtg
aacgtggttgccctgtacggcggccagcgttatgacgtgcagctgcgcgccctgcgtcag
ggtccgcagatcgtcgtcggtaccccgggtcgtctgctggaccacctgaagcgcggcacc
ctggacctctccaaactgagcggcctggtactggatgaagcagatgaaatgctgcgcatg
ggctttatcgaagacgtagaaaccattatggcgcagatccctgaagggcatcagaccgcg
ctgttctccgccaccatgccggaagctatccgtcgcattacccgtcgctttatgaaagag
ccgcaggaagtgcgcattcagtccagcgtgacgactcgcccggatatcagccagagctac
tggactgcctacggcatgcgtaaaaacgaagcgctggtgcgtttcctggaagcggaagac
tttgatgcggcgattatcttcgtccgtaccaaaaacgcgaccctggaagtagctgaagcg
ctggagcgtaatggctacaacagcgcggcgctgaacggcgacatgaaccaggcgctgcgt
gagcagactctggaacgcctgaaagatggtcgtctggatatcctgattgcgactgacgtt
gcggcccgtggcctggacgttgagcgtatcagcctggtggtgaactacgacatcccaatg
gattctgaatcctacgttcaccgtatcggccgtactggtcgtgccggtcgtgctggccgc
gcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgcaacatcgaacgcaccatg
aagctgaccattcctgaagtggaactgcctaacgcggagctgctgagcaagcgtcgtctg
gaaaaattcgccgcgaaagttcagcagcagctggaaagcagcgatctggatcagtaccgt
gcactgctggcgaaaatccagccgacggcggaaggtgaagagctggacgtggaaacgctg
gctgctgcgctgctgaagatggctcagggcgaacgttcgctgatcgttccgccggacgcg
ccgatgcgtccacgtcgtgaattccgcgatcgtgacgatcgtttcgaccgtcgtggcgac
cgtaatgatcgcggcccgcgcggcgatcgcgaagatcgtccgaagcgtgagcgtcgtgac
gtgggtgacatggagctgtatcgcattgaagtgggtcgcgatgacggcgttgaagtgcgt
catatcgttggcgcgatcgccaatgaaggcgatatcagcagccgttacatcggtaacatc
aagctgttcgcttctcactccaccattgagctgccgaaagggatgccgggcgaagtgctg
cagcactttactcgtacccgtatcctgaacaagccgatgaacatgcagctgctgggcgat
gcgcagccgcgcaccgaacgtcgtggcggcggtgagcgtcgcgaaggcggccgtggcttt
ggcggcgagcgtcgtgaaggcggccgtggcttcggtggcgaacgtcgtgaaggcggtcgt
ggtgaaggacgtcgtttcagcggcgaacgtcgtgaaggccgtgcgccgcgtcgtgacgat
gcatccgcgccgcgccgcgatgactcagccggccgccgtcgcttcggtggcgatgcgtaa
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