Klebsiella pneumoniae 30660/NJST258_1: KPNJ1_03753
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Entry
KPNJ1_03753 CDS
T03176
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kpa
Klebsiella pneumoniae 30660/NJST258_1
Pathway
kpa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KPNJ1_03753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpa03019
]
KPNJ1_03753
Enzymes [BR:
kpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KPNJ1_03753
Messenger RNA biogenesis [BR:
kpa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KPNJ1_03753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
DUF6482
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AHM86159
LinkDB
All DBs
Position
complement(3572973..3574574)
Genome browser
AA seq
533 aa
AA seq
DB search
MSKKLSIVCVNRAAMAHWPLSALSGLLMPASQARHSFADFMRPVTKSARLRPFMALWFLP
SLIAIISLKTTPFTGPGRFGVVMSFDSLGLNPDILRAVAEQGYVEPTPIQQQAIPAVLQG
RDLMASAQTGTGKTAGFTLPLLQRLIQNEPHAKGRRPVRALILTPTRELAAQVGENVRDY
SKYLNIRSLVVFGGVSINPQMMKLRGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEA
DRMLDMGFIHDIRRVLAKLPARRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASE
QITQHVHFVDKNRKRELLSQLIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGN
KSQGARTRALADFKSGGIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGR
AAATGEALSLVCVDEHKLLRDIERLLKKEIPRIAIAGYEPDPSIKAEPIQNGRQQRGGGR
GQGQGRGGQGQGRSGQPRSQNNAPRRQDGEAPKARTQDGKPPRRRRPRKPAGE
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgaaaaaattaagtatcgtctgcgttaaccgcgctgctatggcccactggccgctg
agcgcgctcagcggccttctcatgcccgccagccaggcgcggcattcttttgcagatttt
atgcggcctgtcacaaaatctgctagactgcgccccttcatggcattgtggtttttgcca
tctcttatcgcaataatctccctgaaaactacgcccttcaccgggccggggcggttcgga
gttgttatgtcttttgattccctaggcctgaatcccgatatcctgcgcgctgtcgctgag
cagggctacgttgagccgacccctatccagcagcaggcgatcccggcggtactgcagggc
cgtgacctgatggccagcgcccagaccggcaccggtaaaacggcgggctttaccctgccg
ctgctgcagcgcctgatccagaatgagccgcacgcaaagggccgtcgtccggtgcgcgcg
ctgatcctgaccccgacccgtgagctggcggcgcaggtgggcgagaacgtccgcgattac
agtaaatacctgaatattcgctcgctggtggtctttggcggcgtgagcatcaacccgcag
atgatgaagctgcgcggcggcgtcgacatcctcgtcgccaccccgggccgtctgctggat
cttgaacatcagaacgccgtcagtcttgataaagttgaaatcctcgtgctggacgaagcg
gaccgtatgctggatatgggctttatccatgacatccgtcgcgtactggccaaactgccg
gcgcgtcgacagaacctgctgttctcggcgaccttctccgacgagatcaagggcctggcc
gagaaactgctgcacaacccgctggaagtggaagtggcgcgtcgtaacaccgcgtccgag
cagatcacccagcacgtccatttcgttgacaagaaccgcaagcgtgaactgctgtcgcag
cttatcggcgaaggcaactggcagcaggtgctggtgtttacccgtaccaagcatggcgcc
aaccacctcgcggaacagctcaacaaagacggcatccgcagcgcggcgatccatggcaac
aagagccagggagcgcgtacccgcgcgctggccgactttaaatccggcggcattcgcgtg
ctggtggcgaccgatatcgccgcccgcggtctggatatcgaagagctgccgcacgtggtg
aactacgagctgccgaacgtaccggaagattacgtccaccgtatcggccgtaccggtcgc
gcggcggccaccggcgaagccttatcgctggtgtgcgtggatgagcataagctgctgcgc
gatatcgagcgcctgctgaaaaaagagatcccgcgcatcgcgattgccggctatgagccg
gatccgtccattaaagccgaacctatccagaacggtcgccagcagcgcggcggcggtcgt
gggcaaggtcagggacgcggcggccagggtcagggacgcagcggacagccgcgcagccag
aataatgccccgcgccgtcaggacggcgaggcgccgaaagcgcgcactcaggacggcaaa
ccgccgcgccgccgtcgcccgcgtaaaccggctggcgaataa
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