Keratinibaculum paraultunense: JL105_00030
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Entry
JL105_00030 CDS
T07032
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
kpar
Keratinibaculum paraultunense
Brite
KEGG Orthology (KO) [BR:
kpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kpar03032
]
JL105_00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
kpar03400
]
JL105_00030 (gyrB)
Enzymes [BR:
kpar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JL105_00030 (gyrB)
DNA replication proteins [BR:
kpar03032
]
Prokaryotic type
DNA Topoisomerases
JL105_00030 (gyrB)
DNA repair and recombination proteins [BR:
kpar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JL105_00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QQY79768
LinkDB
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Position
4445..6355
Genome browser
AA seq
636 aa
AA seq
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MIKENNGRKYTAQEIQVLTGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGVC
DTINVIINEDNSIIVEDNGSGIPVEVHPQTGKSTVETVLTMLHAGGKFNNSAYKVSGGLH
GVGIAVVNALSEYLIVRVKRDGKVYMQRFERGIPVTELKVIGKSNNTGTIIEFKPDAEIF
DEVNFDFKTLESRLREMAFLNKGVKITLEDKRSNIKKEFHYEGGIKSFVEYLNKNKTPIQ
KDIMYFESEKDNTVVEVAMQYTDGYSENIYTFANNINTQEGGTHLSGFKTALTRAINDYG
RKYGYIKENEDNLQGDDVREGLTAILSVKLMEPQFEGQTKTKLGNSEVRGIVETLTYEFL
MSYLEENPKDGKSILEKALSASRAREAARKAREISRKRSILDNTTLPGKLADCQENNLEV
TEIFIVEGDSAGGSAKQARDKRYQAILPLKGKIMNVEKARLDKVLGFDEIRAMITAFGTG
IGSEFDIDKLRYGKIIIMTDADVDGAHIRTLLLTFFYRYMRELIENGHVYIAQPPLYKVS
KGKKDYYAYSDKELEELLEKIGDSNYTVQRYKGLGEMNPEQLWETTMDPEKRILLKVNIE
DAIAADEIFTILMGDKVKPRREFIQTNAKLVKNLDI
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagaaaacaatggaagaaaatatacagctcaagaaattcaagtgttgacagga
ttagaaccagtaagaaaaagaccaggaatgtatattggaagtacaggacctagaggacta
catcacttagtatatgaagtagtagataatagtatagatgaagcattagcaggtgtatgt
gatactataaatgtcattataaatgaagataattcaataatagtagaagataatggctca
ggaatacctgtagaggtacatcctcaaacaggtaaatctactgtagaaacagttttaact
atgcttcatgcaggaggtaaatttaataatagtgcatacaaggtttctggtggtttacat
ggtgttggtattgccgttgtaaatgctttatctgaatatttaatagttagggtaaaaaga
gatggaaaagtatatatgcaaagatttgaaagaggtattccagtaacagaacttaaagtg
attggaaaatcaaataatacaggaacaattatagaatttaaaccagatgctgaaatattt
gatgaagttaattttgattttaaaacattagaatctagattaagggaaatggcattttta
aataaaggtgttaaaataactttagaagataaaagaagcaatattaaaaaagaattccac
tatgaaggtggtataaaatcttttgtagaatatttaaataaaaacaaaactcctatacaa
aaagatataatgtattttgaatcggaaaaagataatacagtagtagaagtagctatgcaa
tatactgatggctattcagaaaatatatatacttttgctaataatattaatacacaagaa
ggtggaactcatcttagtggatttaaaactgctttaactagagctattaatgattatgga
aggaaatatggatatataaaagaaaatgaggataatcttcaaggagatgatgtaagagaa
ggtttaactgctatattgtcagtaaaattgatggaacctcaatttgaaggtcagactaag
acaaaattaggaaatagtgaagtgcgtggtatagtagaaactttaacttatgaattttta
atgagctatcttgaagaaaacccaaaagatggaaaatcaatattagaaaaagccttgagc
gcttcaagagcaagggaggcagcaagaaaagccagagaaatttcaagaaaaagaagtata
ttagataatactactttgcctggcaaattagcagattgtcaagagaacaatttggaagta
actgaaatatttatagtagaaggggattcagcaggaggaagtgctaaacaagctagagat
aaaagatatcaagctattttaccattaaaaggaaaaataatgaatgtagaaaaggcaaga
ttagataaagttttaggatttgatgaaataagggctatgataacggcgtttggaactgga
attggcagtgaatttgatatagataaactaagatatggtaaaataataatcatgacagac
gcagacgtagatggagctcatataagaacattattattgacattcttctatagatatatg
agagaattaatagagaatggtcatgtttatattgcacaaccacctctatataaagtatca
aaagggaagaaggactactatgcttatagtgataaagaattagaagaattgcttgaaaaa
ataggtgattctaactatacagttcaaagatataagggtcttggagaaatgaatccagaa
caattatgggaaactactatggatccagaaaaaagaatattactaaaagtaaatatagaa
gatgcgatagcagcagatgaaatatttactatattaatgggagataaggttaaacctaga
agagaatttatacaaactaatgctaaattggttaaaaatttagatatatag
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