Keratinibaculum paraultunense: JL105_05100
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Entry
JL105_05100 CDS
T07032
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
kpar
Keratinibaculum paraultunense
Pathway
kpar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JL105_05100 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpar03019
]
JL105_05100 (rny)
Messenger RNA biogenesis [BR:
kpar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JL105_05100 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF4064
UPF0154
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
QQY80844
LinkDB
All DBs
Position
complement(1034969..1036510)
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AA seq
513 aa
AA seq
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MDIVITIIGIIIGIIVGIVAGYYIRKNIGERKIKNAEELAIKIIEDANHEAETRKKEVLL
EAKEEVHKIRIENEKENRERRSEIQKLERRLMHKEESIDRKSETLERREEILNKKEKELN
EKEILINELYEKQVEELERLSGLTSEEAKELLLNDIKKEIAHESAMIIKEIEAQTREEAE
KRAREIISCAIQRCAADHVAETTVTVVNLPNDEMKGRIIGREGRNIRTLETLTGIDLIID
DTPEAVVLSGFDPIRREIARIALEKLIVDGRIHPARIEEMVEKAKVEVDNIIKEEGEQAA
FETGIHNLHPELIKLLGRLKYRTSYGQNVLKHSIEVSHIAGVMAAELGANVKIAKRAGLL
HDIGKAVDHEIEGPHVDIGVDIARRYRESKEVLHAIAAHHGDIEPQSVEAVLVQAADAIS
AARPGARRETLEAYIKRLEKLEEIANSFDGIEKSYAIQAGRELRIMVKPEDVKDDEIVHT
AREIAKRIESELDYPGQIKVNVIRETRAVEYAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
attgatattgtaataaccatcataggtattatcataggtattattgtcggaattgtagct
ggctattatataaggaaaaatattggtgaacgaaaaatcaaaaatgccgaagaattagct
ataaagattattgaagatgctaatcatgaagctgaaacacgtaaaaaagaggttttactg
gaagcaaaagaagaagttcacaaaataagaattgaaaatgaaaaagaaaatagagaaaga
cgatcagaaatacaaaaattagaacgtcgcttaatgcacaaagaagaatctatagataga
aaaagtgaaactcttgaaagaagagaagaaattcttaataaaaaagaaaaggaactaaat
gaaaaagaaattcttataaatgaactctatgaaaagcaagtagaagaattagaaagactt
tcaggcttaacctccgaagaagcaaaagaattattattaaacgatattaaaaaagaaata
gctcatgaatctgccatgattattaaagaaattgaagcacaaactagagaagaagctgaa
aaaagagcacgagaaatcatttcatgcgctattcaaagatgtgctgcagaccatgttgca
gaaacaacagtaacagtagtaaatttaccaaatgatgaaatgaaaggtagaataattggt
agagaaggtagaaatattagaacacttgaaactttaacaggaatcgatctaataattgac
gatacgccagaagcggtagtattatctggatttgatcctataagaagagaaattgcaaga
attgctttagaaaaattaattgtagatgggagaatacatcctgcaagaattgaagaaatg
gttgaaaaagctaaagtggaagttgataatattataaaagaagaaggtgaacaagcagca
tttgaaacaggtattcataatttacatccagaattaataaagttacttggtagattaaaa
tacagaacaagctatggtcaaaacgttttaaaacattctatcgaagtatctcatattgca
ggggttatggcagccgagttaggggcaaatgttaaaatagctaaaagagcaggattattg
catgatatagggaaagccgtagatcacgaaatagaaggtcctcatgtagatattggagta
gatatagctagaagatatagagaatcaaaagaagttttgcatgctatagcagctcatcat
ggagatatagaacctcagagtgtagaagctgttttagtccaagctgctgatgcaatttct
gctgcaagacctggtgcaaggagagagactttagaagcttatataaaaaggcttgaaaaa
ttagaagaaattgcaaattcatttgatggaattgaaaaatcttatgctatacaagcagga
cgtgaattaagaattatggtaaaacctgaagatgttaaagatgacgaaatagttcacact
gcaagagaaattgctaaaaggatagaatccgaattagattatccaggacaaataaaagta
aatgttattagagaaacaagagctgttgaatatgcaaaataa
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