Keratinibaculum paraultunense: JL105_05180
Help
Entry
JL105_05180 CDS
T07032
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kpar
Keratinibaculum paraultunense
Pathway
kpar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JL105_05180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpar03019
]
JL105_05180
03016 Transfer RNA biogenesis [BR:
kpar03016
]
JL105_05180
Enzymes [BR:
kpar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JL105_05180
Messenger RNA biogenesis [BR:
kpar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JL105_05180
Transfer RNA biogenesis [BR:
kpar03016
]
Prokaryotic type
tRNA degradation factors
JL105_05180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_RRP5
GcvP2_C
Motif
Other DBs
NCBI-ProteinID:
QQY80691
LinkDB
All DBs
Position
complement(1051305..1053395)
Genome browser
AA seq
696 aa
AA seq
DB search
MEKRFKYDLAGRSLIVTIGKVAEQANGACLLQYGDTVVLVTATASKEPREDIDFFPLSVD
FEEKLYAVGKIPGGFIKREGKPSDKAILTSRLIDRPIRPLFPDGYRNDVQVIATVLSVDQ
DCTPDIVAMIGSSIALTISDIPFNGPTASVSVGLVNEELVINPTAEERDNSDMNLIVSGT
ENAIMMVEAGANELPESIILDGILYAHEEIKKLCKFIESIQLEVGKEKQEYQVFKPDDEI
EKKVREYATEKLIEAIKTVEKQERENNIESVKEETINKFIEEYPENDEDISEVLDEIVKE
EVRRLILEEGIRPDNRKIDEIRPISCEVGILPRVHGSGLFTRGQTQVLTVATLGASSDVQ
IIDGISEEEFKRYMHHYNFPPYCVGDTRPLRGPNRREVGHGALAERALEPVIPEENEFPY
TIRLVSEVLSSNGSSSQASVCGSTLALLDAGVPIKAPVAGIAMGLIKSEEKVVILTDIQG
LEDHLGDMDFKVAGTREGITAVQMDIKIPGINRAILKEALLRARKARLFILDKMNEVISK
PREELSPYAPRIFTMQVDPDKIRDIIGPGGKMINKIIDETGVKIDIEDDGKVFIVSDNAE
NGKKAVELINKITKDVEVGETYLGQVVRIVPFGAFVEFPNGKEGLVHISNISHERIDKVE
DVLKVGDEILVKVIDIDGQGRINLSRKATLPKENKK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacggtttaaatatgacttagcaggaagatctctaattgtaactattgggaag
gttgctgaacaagctaatggagcatgcttattacaatatggagatactgtagtattagtt
actgcaactgcgtctaaagaacccagggaagatatagatttttttccactaagtgtagat
tttgaagaaaaattatatgcagtaggtaaaatacctggaggatttataaaaagagaaggc
aaacctagtgataaagctatacttacatctagattgatagatagaccaattcgcccttta
tttcctgatggatatagaaacgatgtacaagttatagcaacagtcttatctgtagatcaa
gattgtactccagacattgttgctatgattggttcttctatagcattgacaatatctgat
ataccttttaatggtcctactgcttcagtttcggtaggtttggttaatgaagagttagta
ataaatccaacagcagaagaaagggataattcagatatgaatctgatagtttctggtact
gaaaatgctataatgatggtagaagcaggagcaaatgaattaccagaatctatcattctt
gatggaattttatatgcacatgaagagattaaaaaattatgtaaatttatagaatctata
caattagaagtgggtaaagaaaaacaagaatatcaagtatttaagccagatgatgagata
gaaaaaaaagttagagaatatgctactgaaaaacttatagaagctataaaaacagtggaa
aagcaggaaagagaaaacaatatagaaagtgtaaaagaagaaactatcaataaatttata
gaagaatatccagaaaatgatgaagatatatctgaagtacttgatgaaatagtaaaagaa
gaagttagaagattaatattagaagaaggtataagaccagataatagaaaaattgatgaa
atccgaccaataagttgtgaagtaggtatacttccaagagttcacggttctggtttattt
acaagagggcaaactcaagtattaactgttgctacattaggcgcttctagtgatgtacaa
ataatagacggaattagtgaagaagagtttaagagatatatgcatcattataattttccg
ccttattgtgttggtgatactagaccgttaagaggaccaaatagaagagaagtagggcat
ggagcattagctgagagagctttagaaccggtaattccggaagaaaatgaatttccatat
acaataaggttagtatcagaggtattaagctcaaatggctctagttctcaagctagtgtc
tgtggaagtacattggctcttttagatgctggagtgccaattaaagcacctgttgcagga
atagctatgggactaataaaatctgaagagaaagtagtaatattaactgacatacaaggt
ttggaagaccatctaggagatatggattttaaagttgcaggtacaagagaggggattact
gctgtacaaatggatataaaaatacctggtataaatagagctatattgaaagaagcatta
ttaagagctagaaaagctagattatttatattagataaaatgaatgaagtaatatccaag
cctagagaagaattatcaccttatgctccaaggatatttacaatgcaagttgatcctgac
aaaataagagatattataggtcctggtggtaaaatgatcaataagataattgatgaaaca
ggtgtcaaaattgacatagaagatgatggaaaagtatttattgtatctgataatgcagaa
aatgggaaaaaagctgttgaattaataaacaaaataactaaagatgtagaagtaggagaa
acatacctaggtcaagtagtaagaatagttccttttggagccttcgtagaatttccaaat
ggtaaagaaggattagtacacatctcaaatatttcacatgaaaggatagataaagtagaa
gatgtattaaaagtaggagatgagattttagtaaaagtaatagatatagatggtcaaggt
agaattaatttatctagaaaagcaactttaccaaaagaaaataaaaaataa
DBGET
integrated database retrieval system
