Keratinibaculum paraultunense: JL105_10465
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Entry
JL105_10465 CDS
T07032
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kpar
Keratinibaculum paraultunense
Pathway
kpar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JL105_10465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpar03019
]
JL105_10465
03009 Ribosome biogenesis [BR:
kpar03009
]
JL105_10465
Enzymes [BR:
kpar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JL105_10465
Messenger RNA biogenesis [BR:
kpar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JL105_10465
Ribosome biogenesis [BR:
kpar03009
]
Prokaryotic type
rRNA helicases
JL105_10465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Cas3-like_C_2
Flavi_DEAD
NAT10_TcmA_helicase
DUF6279
Vts1
Rep_fac_C
Motif
Other DBs
NCBI-ProteinID:
QQY79597
LinkDB
All DBs
Position
complement(2133339..2134937)
Genome browser
AA seq
532 aa
AA seq
DB search
MTRKIKFEELNLSEEIQRAISDMGFEEMSPIQSEAIPYLLNGRDIIGQAQTGTGKTAAFG
IPIVESCKSDDRKLQAIVLCPTRELSIQVAEEIKRLSKYKKDIFVLPIYGGQPINRQIKA
LKKGIQVVVGTPGRIMDHIRRKTLKLDNIRIVVLDEADEMFDMGFRDDIEWIMSYMPAER
QTVFFSATMPDEIVKFAKKYQTNPKIIKVVPKELTVPKVEQYYFELKEHMKTEILCRLMD
VYNPKLCIVFCNTKKKVDELTIELQGRGYFADGLHGDLNQFQRDKVMNKFRNGTIDILVA
TDVAARGIDVDDVDAVFNYDIPHDDEYYVHRIGRTARAGREGMAFSFVVGREKYRIKDIE
KYTKTKITKSALPTLKDIEERQIDILSDKIKEEIDSNNIDKYKDMINILLRDDYDSLDIA
AALLKFYLTNNKLDGNRKLEVVDYGNASFKSIKRIYINIGKRKGVSPRHILGAILNETNL
PRKVVGEIDMYDKFTFVEIPEEYLEQVVKNLNNKRIKGFKIKVEPANPKNDK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaaaaataaaatttgaagaacttaatttatctgaggaaattcaaagagcaatt
tctgatatgggttttgaggagatgtcacctattcaatctgaagcaataccctatttactc
aatggaagggatataataggtcaggctcagacaggaacaggaaaaacagctgcttttggg
ataccaattgttgaaagctgtaaatctgatgatagaaaattacaagctatagttttgtgc
ccaactagggaactttctattcaagttgcagaggaaataaagagattatccaagtataaa
aaagatatatttgtgcttccaatatatggagggcagcctattaataggcagataaaagct
ttaaagaaaggtattcaagttgtggttggtaccccaggtagaataatggatcatattaga
agaaaaactttaaagcttgataatataagaattgtagtattggatgaagctgacgaaatg
tttgatatgggatttagagatgatatagaatggataatgagttacatgccagcagaaagg
caaacagtatttttttcagctactatgcctgatgaaatagtgaagtttgcaaagaaatat
cagacaaatcctaaaattattaaagtagttcctaaagaattaactgtaccaaaagttgaa
caatattattttgaattaaaagagcatatgaaaacagaaatactatgtagacttatggat
gtatataatcctaagttatgtatagttttttgcaatactaagaaaaaggtggatgagtta
actattgaattacaggggagaggctattttgctgatgggcttcatggtgatttaaatcaa
ttccaaagagacaaggttatgaataagtttagaaatgggactatagatatacttgtagcc
actgatgtggcagcaagaggaattgatgtagatgatgtagatgcagtttttaattatgat
attcctcatgacgatgaatactatgttcatagaataggcagaactgctagagcagggcgg
gagggtatggcttttagttttgtagtaggtagagagaagtatagaataaaagatattgaa
aaatatacaaagaccaaaataacaaaaagtgctttacccacattaaaggatatagaagaa
aggcaaatagatatattatcagataaaataaaggaagaaatagatagtaataatattgat
aagtataaggatatgattaatattttattgagagatgattatgattcacttgatatagca
gcagctcttttgaaattttatcttacgaataataaattagatggtaatagaaaattagaa
gtagtagattatggaaatgctagttttaaatctatcaaaagaatatatattaatataggt
aaaagaaagggcgtaagtccaagacatatattaggtgccatattaaatgaaactaattta
ccaaggaaggtagtaggggaaattgatatgtatgataaatttacatttgtggaaattcca
gaagagtatttggaacaagtggttaaaaatttaaataataaaagaattaagggttttaaa
ataaaagtggaaccagctaatccaaaaaacgataaataa
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