Keratinibaculum paraultunense: JL105_10680
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Entry
JL105_10680 CDS
T07032
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
kpar
Keratinibaculum paraultunense
Pathway
kpar02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kpar00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JL105_10680 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpar03021
]
JL105_10680 (rpoD)
Transcription machinery [BR:
kpar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JL105_10680 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DUF7189
Sigma70_r4_2
DnaD_N
Motif
Other DBs
NCBI-ProteinID:
QQY79633
LinkDB
All DBs
Position
2184813..2185886
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AA seq
357 aa
AA seq
DB search
MIKEEKRKDVKKLIETGKKNGFLTYDEIMNCFEDIELDAEQIDELYQTLEEIGIDIVDED
IEEKKDEKKDTKTNVNANKGIDVGDPVKMYLKEIGKIPLLTKEEEVELAKRIEAGDESAK
KELAEANLRLVVSIAKKYIGRGMSFLDLIQEGNLGLIKAVEKFDYTKGYKFSTYATWWIR
QSITRSIADQGRTIRVPVHMIENINKLTRIQRQLVQELGREPTPEEIAEQMNVEVDKVID
MIRIAQKPISLETPIGEEEDSQLGDFIEDDHIESPDAVTTQIMLKEQLLEVLDTLTPREQ
QVLRLRFGLDDGRTRTLEEVGNVFDITRERIRQIEAKALRKLKHPSRSRKLKDYLEE
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagaagaaaaaagaaaagatgtaaaaaaactaattgaaacgggtaaaaaaaat
ggatttctcacttatgatgaaataatgaattgttttgaagatatagaacttgatgctgaa
caaatagatgaattatatcaaacattagaagaaataggtattgatatagtagatgaagac
atagaagaaaaaaaggatgaaaaaaaggatacaaaaactaatgttaatgcaaacaaagga
atagatgttggagatcctgttaaaatgtatttaaaagaaataggtaaaattcctctgctt
acaaaagaagaagaagtagaacttgctaagagaattgaagctggtgacgaatctgcaaag
aaagaattagcagaagctaatttaagactagtcgttagcattgctaaaaaatatataggt
agaggcatgtcttttttagacttaattcaagaaggaaatctaggcctcattaaagcagta
gaaaaatttgattatactaaaggatataaatttagcacttatgctacttggtggataaga
caatctattacaagatctatcgcagatcaaggtagaactataagagtgccagttcatatg
attgaaaatataaataaactcacaaggatacaaagacaattagtacaagaactaggaaga
gaaccaactccagaagaaatagcagaacaaatgaacgttgaagtagataaagtaatagat
atgattagaatagcacaaaaacccatatctttggaaactcctataggagaagaagaagat
agtcaattaggagattttatagaagacgatcatattgaatctccagatgcagttactacc
caaataatgttaaaagaacaattactagaagtattagatacattaactcctagagaacaa
caagtattaagattaagatttggtttagacgatggcagaactagaactttagaagaagta
gggaacgtatttgatataactagagaaagaatacgacaaattgaagcaaaagccctaaga
aaacttaaacacccaagtagaagtagaaaattaaaagattatttagaagaataa
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