Klebsiella pasteurii: LUW96_03070
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Entry
LUW96_03070 CDS
T08655
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
kpas
Klebsiella pasteurii
Pathway
kpas02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kpas00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LUW96_03070 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpas03021
]
LUW96_03070 (rpoD)
Transcription machinery [BR:
kpas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LUW96_03070 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
UHD00058
LinkDB
All DBs
Position
633328..635172
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AA seq
614 aa
AA seq
DB search
MEQNPQSQLKLLVQRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLLLAETNNNTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDLAPTA
THVGSELSQEEMDDDEDEDEEEDDDSSDDDNSIDPELAREKFAELRTQYELTRDTIKAKG
RSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERIIMKLCVEQCKMPK
KNFITLFTGNETSETWFNAAIAMNKPWSEKLLDVKEDVQRGLMKLQQIEQETGLTIEQVK
DINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKF
EYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPT
PEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDNTLELPLDSATTES
LRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLR
HPSRSEVLRSFLDD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaagcttcttgtccaacgtggtaaggagcaaggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgactccgaccag
atcgaagacatcatccaaatgatcaacgacatgggcattcaggtgatggaagaagcgccg
gatgccgatgatctcttgcttgctgaaacgaacaacaataccgacgaagatgcggaagaa
gctgccgcgcaggttctctccagcgttgagtctgaaatcggacgcacaaccgacccggtg
cgcatgtacatgcgtgaaatgggtaccgtcgaactgctgacgcgcgaaggcgaaattgac
atcgctaaacgcatcgaagacgggattaaccaggtccagtgctcagttgcggaatacccg
gaagcgatcacctatctgctggagcagtacgatcgcgttgaagctgaagaagcacgcctg
tccgatctgatcaccggctttgtcgacccgaacgctgaagaagatctggcgccaaccgcc
actcacgtcggttctgaactctctcaggaagagatggatgacgacgaagacgaagatgaa
gaagaagacgacgacagcagcgatgacgacaacagcatcgaccctgagttggcgcgcgag
aaattcgccgagctgcgtacgcagtacgaactgacccgcgacaccatcaaagcgaaaggt
cgtagccacgccgcagcgcaggaagagatcctcaagctgtctgaagtgttcaaacagttc
cgtctggtgccaaagcagttcgattatctggttaacagcatgcgtgtcatgatggatcgc
gttcgtactcaagaacgtatcatcatgaagctgtgcgttgaacagtgcaaaatgccgaag
aaaaacttcatcactctgttcaccggcaacgaaaccagcgaaacctggttcaatgcggcc
atcgccatgaacaagccgtggtcagagaagctgcttgacgtgaaagaagacgttcagcgc
ggcctgatgaaactgcagcagattgagcaagagaccggcctgaccattgagcaggtaaaa
gatatcaaccgtcgtatgtctatcggtgaagcgaaagcgcgccgtgcgaagaaagagatg
gttgaagcgaacctgcgtttggttatctcgatcgccaagaaatacaccaaccgcggtctg
cagttcctcgacctgatccaggaaggcaacatcggtctgatgaaagcggttgataagttt
gaataccgccgcggctacaagttctccacctacgcaacctggtggatccgtcaggcgatc
acccgttctatcgcagaccaggcgcgcaccatccgtattccggtgcatatgattgagacg
atcaacaaactcaaccgtatttcccgccagatgctgcaggagatgggccgcgagccgacg
ccggaagagctggccgagcgtatgctgatgccggaagataaaattcgtaaggtgctgaaa
atcgccaaagagccgatctccatggaaacgccaattggcgacgatgaagattcgcatctg
ggagatttcatcgaggataacaccctcgagctgccgctggactctgccaccaccgagagc
ctgcgcgccgccacccatgacgttctggctggcctgaccgcccgtgaagcgaaagtcctg
cgtatgcgcttcggtatcgacatgaataccgatcacacgctggaagaagtgggtaaacag
ttcgacgttacccgcgaacgtattcgtcagatcgaagcgaaggcgctgcgtaaactgcgc
catccaagccgctctgaagtgctgcgtagcttcctcgacgattaa
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