Klebsiella pasteurii: LUW96_07970
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Entry
LUW96_07970 CDS
T08655
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
kpas
Klebsiella pasteurii
Pathway
kpas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kpas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LUW96_07970 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpas03021
]
LUW96_07970 (rpoB)
03400 DNA repair and recombination proteins [BR:
kpas03400
]
LUW96_07970 (rpoB)
Enzymes [BR:
kpas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LUW96_07970 (rpoB)
Transcription machinery [BR:
kpas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LUW96_07970 (rpoB)
DNA repair and recombination proteins [BR:
kpas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LUW96_07970 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
UHD00959
LinkDB
All DBs
Position
1663702..1667730
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIK
SYSGNSELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVVFEIRDNKLQME
LVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIAGKVASKD
YIDESTGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYMSETVRVDPTNDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKEDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT
DEIHYLSAIEEGNYVIAQANSNLDDEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPIERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTIIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFGRIYAVLVSGGIEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGEKINAMLKQQQEVAK
LREFIQRAYDLGTDVRQKVDLNTFTDEEVMRLAENLKKGMPIATPVFDGAKESEIKELLQ
LGGLPTSGQITLFDGRTGEQFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccgcag
gttctggacataccttatctcctttctatccagcttgactcgtttcagaagttcatcgag
caagatcctgaagggcagtatggtctggaagcagctttccgttccgtattcccgattaaa
agctacagcggtaactccgagctgcagtacgtcagctaccgtctgggcgaaccggttttt
gacgttaaagaatgtcagatccgtggcgtgacctactcggcaccgctgcgtgtcaaactg
cgtctggtgatctacgagcgcgaagcgccggaaggcaccgttaaagacattaaagaacaa
gaagtctacatgggcgaaattccgctcatgaccgacaacggtaccttcgttattaacggt
accgagcgcgttatcgtttctcagctgcaccgtagcccgggcgtcttctttgacagtgac
aaaggtaagacccactcttccggtaaggtcctgtataacgcacgtatcattccttaccgc
ggctcctggctggacttcgagttcgacccgaaagacaacctgtttgtccgtattgaccgt
cgtcgtaagctgccggctaccatcatcctgcgcgcgctgaattacaccactgagcagatc
cttgacctgttcttcgagaaagtggtttttgaaattcgcgataataagctgcagatggag
ctggttccggagcgtctgcgcggcgaaaccgcctccttcgacatcgaagctaacggtaaa
gtgtacgttgagaaagggcgtcgcatcaccgcacgtcacattcgccagctggaaaaagac
gatatcaaacatatcgaagttccggttgagtacattgcgggcaaggttgcctctaaagac
tatatcgacgaatctactggcgagctgatctgcccggcgaacatggagctgagcctggat
ctgctggccaagctgagccagtctggccataagcgtatcgaaacgctgttcaccaacgat
ctggatcacggtccgtacatgtccgagactgtacgtgtcgacccgaccaacgatcgtctg
agcgcgctggtagaaatctaccgcatgatgcgtcctggtgagccgccgactcgcgaagcg
gctgaaagcctgttcgagaacctgttcttctctgaagaccgctacgatctgtccgcggta
ggtcgtatgaagttcaaccgttctctgctgcgcgacgaaatcgaaggttccggtatcctg
agcaaagaagacatcatcgaagtgatgaagaagctcatcgatatccgtaacggtaaaggc
gaagtcgatgatatcgaccacctcggaaaccgtcgtattcgttccgtgggtgaaatggcg
gaaaaccagttccgcgttggcctggtacgtgtagagcgtgcggtgaaagagcgtctgtct
ctgggcgatctggataccctgatgcctcaggatatgatcaacgccaagccgatttctgcg
gcagtgaaagagttctttggttccagccagctgtctcagtttatggaccagaacaacccg
ctgtctgagattacgcacaaacgccgtatctccgcactcggcccaggcggtctgacccgt
gaacgcgcaggctttgaagttcgagacgtacacccgactcactatggtcgcgtatgtcca
atcgaaacccctgaaggtccgaacatcggtctgatcaactccctgtccgtgtacgcacag
actaacgaatatggcttccttgagacgccgtatcgtaaagtgactgacggtgttgtaacc
gacgaaattcattacctgtctgctatcgaagaaggcaactacgttatcgctcaggcgaac
tccaacctcgatgacgaaggccactttgtagaagatctggttacctgccgtagtaaaggc
gaatccagcttgttcagccgcgatcaggttgactacatggacgtttccacccagcaggtg
gtttctgtcggtgcgtccctgatcccgttcctggaacacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggccgttccaactctgcgcgctgataagccgctggtt
ggtaccggtatggaacgtgctgttgccgttgactccggtgtaactgcggttgctaagcgt
ggcggtaccgttcagtacgtggatgcatcccgtatcgttatcaaagttaacgaagacgag
atgtacccgggcgaagcaggtatcgacatctataacctgaccaagtacacccgttctaac
cagaacacctgcatcaaccagatgccgtgcgtgtctctgggtgagccaattgagcgcggc
gacgtgctggctgacggcccgtccaccgacctcggtgagctggcactcggtcagaacatg
cgcgtagcgttcatgccgtggaacggttacaacttcgaagactccattctcgtttccgag
cgtgttgtccaggaagaccgttttaccaccatccacattcaggaactggcgtgcgtgtct
cgtgacaccaagctggggccggaagagatcactgccgacatcccgaacgtgggtgaagct
gcgctctccaaactggatgaatccggtatcgtttatatcggcgcggaagtaaccggcggc
gatattctggttggtaaggtgacgccgaagggtgaaacccagctgacgccggaagagaaa
ctgctgcgtgcgatcttcggtgagaaagcgtctgacgttaaagactcttccctgcgcgtg
cctaacggtgtctctggtaccattatcgacgttcaggtctttacccgtgacggcgtagaa
aaagacaagcgtgcgctggaaatcgaagagatgcagctcaaacaggctaaaaaagacctg
tctgaagaactgcagatcctcgaagctggcctgtttggtcgtatctacgcggtgctggtt
tccggcggtatcgaagctgagaagctcgacaagctgccgcgcgatcgctggctggaactg
ggcctgaccgacgaagagaaacagaatcagctggaacagctggctgagcagtacgacgaa
ctgaaacacgagttcgagaaaaaactcgaagcgaaacgccgcaaaatcactcagggcgac
gatctggcaccgggcgtgctgaagattgttaaagtgtatctggccgttaaacgtcagatt
cagcctggtgacaaaatggcaggtcgtcacggtaacaagggtgttatctctaagatcaac
ccgatcgaagatatgccttacgatgaaaacggcacgccggtagacatcgtactgaacccg
ctgggcgtaccgtctcgtatgaacatcggtcagatcctggaaactcacctgggtatggct
gcgaaaggcattggcgagaaaatcaacgccatgctgaaacagcagcaggaagtcgccaaa
ctgcgcgagttcatccagcgtgcctacgatctgggtaccgacgttcgtcagaaggtagat
ctgaataccttcactgacgaagaagttatgcgtctcgctgaaaacctgaaaaaaggtatg
ccgatcgcaacgccggtcttcgacggtgcgaaagagtctgaaatcaaggaactgttacag
cttggtggcctgccgacttccggccagatcaccctgttcgacggtcgtaccggtgagcaa
ttcgagcgccaggttaccgttggctacatgtacatgctgaaactgaaccacctggttgat
gacaaaatgcatgcgcgttctaccggttcttacagcctggttactcagcagccgctgggt
ggtaaggcgcagttcggtggtcagcgcttcggggagatggaagtgtgggcgctggaagca
tatggcgcagcatacaccctgcaggaaatgctcaccgttaagtctgatgacgtgaacggc
cgtactaagatgtataaaaacatcgtagacggcaaccatcagatggaaccgggcatgccg
gaatccttcaacgttctgttgaaagagattcgctcgctgggcatcaacatcgaactggaa
gacgagtaa
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integrated database retrieval system
