Klebsiella pasteurii: LUW96_15860
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Entry
LUW96_15860 CDS
T08655
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kpas
Klebsiella pasteurii
Pathway
kpas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LUW96_15860 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpas03019
]
LUW96_15860 (rhlE)
Enzymes [BR:
kpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LUW96_15860 (rhlE)
Messenger RNA biogenesis [BR:
kpas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LUW96_15860 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
AAA_22
P-loop_SecA
DUF6482
Motif
Other DBs
NCBI-ProteinID:
UHC97217
LinkDB
All DBs
Position
3344625..3345974
Genome browser
AA seq
449 aa
AA seq
DB search
MSFDSLGLNPEILRAVAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QHLVQKEPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNVRSLVVFGGVSINPQMM
KLRSGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDEIKSLAEKLLHNPLEIEVARRNTASEQVSQLVHFVDKKRKRELLSQMI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLHDI
ERLLKKEIPRIALAGYEPDPSIKAEPIQNGRQQQRGGGRGGQSQGRGGQGQGRGQQSAPR
RIDGEAPKARTQDGKPPRRRRPRKPAAAE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaatcctgaaatcctgcgcgccgtcgctgagcagggc
tacgttgagccaacccctattcagcagcaggccatcccggcggtattacagggtcgcgat
ttgatggccagcgcccagaccggtactggtaaaacggcgggatttacgctgcctctgctt
cagcacctggtccagaaagaaccgcacgctaaaggccgtcgtccggtacgcgcgctgatc
ctgacccccacgcgcgagctggcggcgcagattggcgaaaacgtgcgggattacagcaaa
taccttaatgttcgttcgctggtggtgttcggcggcgtgagcattaacccgcagatgatg
aagctgcgcagcggcgtcgatatcctggtggcaacgcccggccgcctgctggatcttgaa
catcagaacgccgtgagcctggacaaagttgaagtgctggtgctggatgaagccgaccgt
atgttggatatgggctttattcacgatattcgccgggtactggcgaagctgccggcgaag
cgccagaacctgctgttctccgcaaccttctccgacgagattaaatcgctggcggaaaag
ctgttgcataatccgctggaaattgaagtcgcccgccgcaacactgcttctgaacaggtg
agccaactggtgcattttgtcgacaaaaagcgcaagcgcgagctgctatcgcagatgatc
ggtgaaggcaactggcagcaggtgctggtctttacccgcaccaagcacggcgctaaccat
ctggcggagcagcttaataaagacggcatccgcagcgccgccattcatggcaacaagagc
cagggcgcgcgtacccgcgcgttggctgactttaaatccggtggcattcgcgtgctggtg
gcgaccgatatcgccgcgcgcggtctggacattgaagagcttccgcacgtggtgaactac
gagctgccaaacgtaccggaagactatgtgcaccgtattggtcgtaccggtcgcgccgcg
gcaacgggcgaagcgctgtcgctggtctgcgtagatgaacataaactgctgcatgatatc
gaacgcttgctgaaaaaagagatcccgcgtatcgcccttgcgggctatgagccggatccg
tcgatcaaagccgagccgattcagaacggtcgtcagcagcagcgcggcggcggccgtggt
ggccaaagccagggccgcggcggccagggacaaggtcgcggtcagcagtccgccccgcgt
cgtatcgatggcgaagcgcctaaagcgcgaactcaggacggtaaacctcctcgccgtcgt
cgcccgcgcaaacccgcggcggctgagtaa
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