Klebsiella pasteurii: LUW96_18820
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Entry
LUW96_18820 CDS
T08655
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kpas
Klebsiella pasteurii
Brite
KEGG Orthology (KO) [BR:
kpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kpas03016
]
LUW96_18820
Enzymes [BR:
kpas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LUW96_18820
Transfer RNA biogenesis [BR:
kpas03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LUW96_18820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
OSR1_C
ODP
Motif
Other DBs
NCBI-ProteinID:
UHC97763
LinkDB
All DBs
Position
complement(3980987..3982921)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGVVKGTEKGFGFLEVDSQKSYFIPPPQMKKVMHGDRI
IAVVNTEKERESAEPEELVEPFLTRFVGKVHKKDDRLSIVPDHPLLKDAIPCRAARGVEH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQYITFGDDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLERRDLTALAFVTIDSASTEDMDDALYVEQNADGKLHLTVAIADPTAWIAEGSK
LDNTAKIRAFTNYLPGFNIPMLPRELSDDLCSLRPNAVRPVLACRMILADDGTIEDDIEF
FAATIESKAKLAYDDVSNWLENSGSWQPDSEIIARQIKLLQEACLRRSEWRKNHALVFKD
RPDYRFVLGDKGEVLNIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNVHTGFD
PANTEQLAALLKTHDVHVDPVEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGEAISRPQDDVAIQMAERRRLNRM
AERDVGDWLYARYLNPQAGTTTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGEVVYKVTDVIDVTIAEVRMETRSVIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagactccg
cgcgttgaaggggtcgttaaggggacggaaaaagggtttggcttcctcgaagtcgactcg
cagaaaagctatttcattccgccgccgcaaatgaaaaaagtgatgcatggcgatcgtatt
atcgccgtggtcaatactgaaaaagaacgcgaaagcgctgaaccggaagaactggttgag
ccgttcctgacgcgttttgtcggcaaagttcataaaaaagacgatcgtctttctatcgtt
cctgaccatccgctgctgaaagatgccattccctgccgcgccgcgcgcggcgtagagcat
gattttaaagagggtgactgggccgttgccgaaatgcgccgtcatccgctgaaaggcgac
cgcggtttctacgctgagctcacccagtacattacctttggcgatgatcatttcgttccg
tggtgggtcaccctggcgcgtcataatctggaaaaagaagcgccggacggcgtggcgacc
gagatgcttgatgaaggtctggaacgccgtgatttaacggccctggctttcgtgaccatc
gatagcgccagcaccgaagatatggatgatgcgctgtacgtcgagcagaacgctgacggt
aaactgcacctgaccgtcgctatcgccgatccaaccgcctggattgccgaaggcagcaag
ctggacaacacggcgaaaattcgcgcctttaccaactatctgccgggcttcaacattccg
atgttgccacgcgagctctctgacgacctctgctccctgcgccccaacgcggttcgtccg
gtgctggcctgccgcatgatcctcgctgatgacggaaccatcgaagacgatattgagttc
ttcgcggcgaccatcgagtcgaaagcgaagctggcctacgatgatgtttccaactggctg
gaaaacagcggtagctggcagccggacagcgagattatcgcccggcaaattaaactgctg
caggaggcctgcctgcgtcgtagcgaatggcgtaaaaaccacgcgctggtgttcaaagac
cgcccggattatcgctttgtgttgggcgacaaaggcgaagtgctgaatatcgttgccgaa
cctcgccgcatcgccaaccgtatcgttgaagagtcaatgatcgccgccaacatctgcgcc
gcccgcgtcctgcgcgataagctcggtttcggcgtttataacgtgcataccggattcgat
ccggccaacaccgagcagctcgcggccttactgaagacacacgacgtacacgttgacccg
gtggaagtgctgacgcttgagggcttctgcaagctgcgtcgcgagttggacgcgcagccg
tccggtttcctcgacagccgtattcgccgcttccagtcgtttgcggaaatcagcaccgag
ccgggcccgcacttcgggctgggtcttgaagcctatgcgacctggacctccccgatccgt
aagtacggcgatatgattaaccatcgtctgctgaaagcgattatcaaaggggaagcgatc
tcccgtccgcaggatgatgttgcgatccaaatggctgaacgccgtcgcctcaaccgcatg
gcggagcgcgatgtcggagactggctgtacgcccgctatctgaatccgcaggccggtacc
actacccgctttgctgctgagattatcgatgtcagccgcggcggcatgcgcgtgcgtctg
gttgataacggcgcggttgcctttatcccggcgccgttccttcacgccgtgcgcgatgag
ctggtgtgcagccaggaaaacggcaccgtgcagattaaaggcgaagtcgtctacaaagtc
acggatgtgattgatgtgacaattgccgaagtccgtatggaaacccgtagcgtgattgcg
cgtcctgccgcctga
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