Klebsiella pasteurii: LUW96_20015
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Entry
LUW96_20015 CDS
T08655
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
kpas
Klebsiella pasteurii
Brite
KEGG Orthology (KO) [BR:
kpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpas03019
]
LUW96_20015 (hrpA)
Enzymes [BR:
kpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LUW96_20015 (hrpA)
Messenger RNA biogenesis [BR:
kpas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LUW96_20015 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
WHD_HA2
T2SSE
nSTAND3
nSTAND_NTPase5
ResIII
NACHT
DUF6145
PhoH
AAA_16
NTPase_1
SLFN-g3_helicase
TsaE
Motif
Other DBs
NCBI-ProteinID:
UHD02283
LinkDB
All DBs
Position
4209308..4213153
Genome browser
AA seq
1281 aa
AA seq
DB search
MLRDKSRFARRLHGVKKVKNPDAQQAILQEMAQEIEQAAGRVLLREAARPAIDYPQNLPV
SQKKQEILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRGVKGLIGHTQPRRLAARTVA
NRIAEELQTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEA
HERSLNIDFLLGYLRELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR
YRPIVEDADDTERDQLQAIFDAVDELGRESPGDILIFMSGEREIRDTADALNKLNLRHTE
VLPLYARLSNSEQNRVFQAHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSFRTK
VQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSRPAFTDPEILRTNLASVILQ
MTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQQTAYKLTPMGRQLSQLPVD
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFV
NLWNYLGEQQKALSSNQFRRQCRVDFLNYLRVREWQDIYTQLRQVVKELGLPVNSEPAEY
REIHTALLTGLLSHIGMKDADKQEFTGARNARFSIFPGSGLFKKPPKWTMVAELVETSRL
WGRIAARIEPEWVEPVAQHLIKRSYSEPHWERGQGAVMATEKVTVYGLPIVAARKVNYSQ
IDPALCRELFIRHALVEGDWQTRHAFFRDNLKLRNEIEELEHKSRRRDILVDDETLFEFY
DQRISHDVISARHFDKWWKQASRETPDLLNFEKSMLIKEGAEQVSKLDYPNFWHQGNLKL
RLTYQFEPGADADGVTVHIPLPLLNQVEEAGFEWQIPGLRRELVIALIKSLPKPVRRNFV
PAPNYAEAFLGRATPLELPLLDSLERELRRMTGVTIDREAWQWDQVPDHLKITFRVVDEK
NKKLQEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGRLPESYEQKRGNYKVK
AWPALVDERDSVAIKLFDNPLEQQQEMWRGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYF
NPYGKVLDLIDDCISCGVDKLIDEAGGPVWTEEGFAALHEKVRAELNETVVEIAKQVEQI
LTAVFNINKRLKGRVDMTMALGLSDIKSQMSGLVYRGFVTGNGFRRLGDTLRYLQAIEKR
LEKMAIDPHRDRAQMLKVESIQQAWQQWLNKLPPQRRQDNDVQEIRWMIEELRVSLFAQQ
LGTPYPISDKRVLQAMDAIVA
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcgataagtcgcgctttgcccgtcgcctgcacggcgtgaagaaggttaaaaat
cctgatgcccagcaggccatccttcaggagatggcgcaagaaattgaacaggcggcaggg
agagtcctgctgcgcgaagccgcccgaccggctatcgattatccgcagaatctgccggtt
agccagaaaaaacaggagattctcgaagccgtgcgcgatcaccaggtggtgattgtggcg
ggggaaaccggttcggggaaaaccacccagctgccaaaaatttgtatggagctggggcgc
ggcgttaaaggcttaattggccatacgcaaccgcgtcgtctggccgcgcgtaccgtcgcc
aaccgtatcgccgaagagctgcaaacggagccgggcggctgcattggctataaagtccgc
tttagcgaccacgtcagcgataacaccatggttaagctgatgaccgacggtattctgctg
gcggaaatccagcaggatcggctgctgatgcagtacgacaccatcattatcgatgaagcg
cacgaacgcagcctcaatatcgacttcctgcttggctacctgcgggaactgctgccccgt
cgcccggatttgaaaattataatcacctcggcgaccatcgatccggaacgcttctcgcgc
cactttaacaacgcgccgattatcgaagtgtccgggcgcacctacccggtagaagtgcgc
tatcgacccatcgttgaagacgccgacgacaccgagcgcgatcagctgcaggcgatattt
gacgccgttgatgaactcgggcgcgaaagccccggtgatatccttatctttatgagcggc
gagcgtgaaatccgcgataccgccgatgcgctcaataagctgaatctgcgccataccgaa
gtgctgcctctgtatgcgcggctttccaatagcgaacagaaccgtgtgttccaggcccac
agcgggcggcggatcgtgctggctaccaacgtcgccgaaacctcgctgaccgtgccgggc
atcaagtacgttattgacccgggtaccgcgcgtatcagccgctacagcttccgtaccaaa
gtgcagcgcctgcctattgagccggtttcccaggcgtcggctaaccagcgtaaaggccgc
tgcggtcgcgtgtcggaagggatctgtattcgtctctattcggaagatgacttcctgtcg
cgcccggcatttaccgacccggagattctgcgcaccaacctggcatccgttatcctgcag
atgaccgcgctgggcctgggcgatatcgccgcgtttccgtttgttgaagcgccggataaa
cgcaatattcaggacggcgttcgcctgctggaagagctgggggcgattaccaccgacgaa
cagcagaccgcttataagctgacgccgatgggccgtcagcttagccagctaccggtggac
ccgcgtctggcgcgcatggtgctggaagcgcaaaaacacggctgcgtgcgcgaggcgatg
attatcacctcggcgctctccattcaggacccgcgcgagcggccaatggacaagcagcag
gcctctgacgagaaacatcgccgtttccacgataaagagtccgacttcctggcgttcgtc
aacctgtggaactacctgggcgagcagcaaaaagcgctctcctcgaaccagttccgccgc
cagtgccgggtcgatttcctcaactacctgcgcgtgcgcgagtggcaggatatctatacc
cagctgcgtcaggtggtgaaagagctcgggctgccggtgaacagcgagccggcggagtat
cgcgaaattcacaccgcgctgctgaccggtctgctgtcgcatatcggtatgaaagacgcc
gacaagcaggagtttaccggcgcgcgcaacgctcgcttctccatcttccctggatcgggg
ttgttcaaaaagccgccaaaatggacgatggtcgccgaactggtggaaaccagccgcctg
tgggggcgtatcgccgcgcgcattgagccggagtgggtcgagccggtggcgcagcatttg
atcaaacgctcgtacagcgaaccccactgggagcgcgggcagggcgcggtgatggcgacg
gaaaaggtcaccgtttacgggctgccgattgtggcggcccgcaaggtcaactatagccag
attgatccggcgctgtgccgcgagctatttatccgccatgcgctggtggagggcgactgg
cagactcgtcacgccttcttccgtgacaacctgaagctgcgcaacgagattgaagagctg
gagcataagtcgcgccgccgcgatattcttgtcgacgacgaaacgctgtttgagttctac
gaccagcgtatcagccatgacgtcatctccgcgcgccattttgacaagtggtggaaacag
gccagccgcgagacgccggatctgctcaactttgaaaagagcatgctgattaaggaaggc
gcggagcaggtcagtaagctcgactatccgaacttctggcaccagggcaacctgaagctg
cgtctcacctatcagtttgaaccgggcgccgacgctgacggcgtaacggtgcatattcca
ctgccgctgctcaaccaggtggaagaagccggatttgagtggcagatcccggggttgcgt
cgcgagctggttatcgccctgattaaatcgctgccgaagccggtacggcgtaacttcgtt
ccagcgccgaactacgcggaggcgtttttaggccgcgcgacgccgctggagctgccgctg
ctggattcccttgaacgtgagctgcggcggatgaccggcgtgactatcgaccgcgaggcc
tggcaatgggatcaggtacccgatcatctgaaaatcactttccgggtggtggacgagaaa
aacaagaagctgcaggaagggcgctcgctgcaggatctgaaagatgcgctgaaaggtaag
gtgcaggagacgctgtccgcggttgccgatgacggtatcgagcagagcgggctgcatatc
tggagctttggccggcttccggagagctacgagcagaagcgcggcaactacaaagttaag
gcctggccggcgctggtggacgagcgcgacagcgtggcgatcaagctgtttgataacccg
ctggagcagcagcaggagatgtggcgcggcctgcgtcgcctgctgctgctgaatatcccg
tcgccgattaaatacctgcatgagaagctgccgaataaagccaagctggggctctatttc
aacccctacggcaaggtgctggatctgatcgatgactgtatctcctgcggcgtggataag
ctgatcgatgaagcgggcggcccggtatggaccgaagagggctttgccgcgctgcatgaa
aaggtgcgcgctgaactcaacgagacggtggtggaaatcgccaaacaggttgagcagatc
ctgaccgcggtgttcaatatcaataaacgcctgaaaggccgcgtggatatgaccatggcg
cttgggctgtcggatatcaaatcgcagatgagcgggctggtgtatcgcggtttcgtcacc
ggcaatggcttccgccgccttggggatacgctgcgctatctgcaggcgattgaaaagcgg
cttgagaaaatggcgatcgatccgcaccgtgaccgcgcgcagatgctcaaggtggagagc
atccagcaggcgtggcagcagtggttgaataagctgccgcctcagcgccgtcaggataac
gacgtgcaggagatccgctggatgattgaagagctgcgcgtcagcctgttcgcccagcag
ctcggcacgccgtatccgatatccgacaagcgagtgctgcaggcaatggacgcgattgtg
gcctga
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integrated database retrieval system
