Klebsiella pneumoniae blaNDM-1: FH42_02305
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Entry
FH42_02305 CDS
T03440
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kpb
Klebsiella pneumoniae blaNDM-1
Brite
KEGG Orthology (KO) [BR:
kpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kpb03016
]
FH42_02305
Enzymes [BR:
kpb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
FH42_02305
Transfer RNA biogenesis [BR:
kpb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FH42_02305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
S1CSD-TOTE-2
ODP
OSR1_C
Motif
Other DBs
NCBI-ProteinID:
AIJ39571
UniProt:
W9BP28
LinkDB
All DBs
Position
complement(470907..472841)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHSEKERESAEPESLVEPFLTRFVGKVQKKDDRLAIVPDHPLLKDAIPCRAARGVEH
DFKQGDWAVAEMRRHPLKGDRGFYAELTQFITFSDDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLTRRDLTALDFVTIDSASTEDMDDALYAESTADGKLLLTVAIADPTAWIAEGSK
LDNAAKVRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMTLAADGTIEDNIEF
FAATIESKAKLAYDDVSDWLEGRGSWQPDSEAIAQQITLLKDVCQRRSEWRQTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNVHTGFD
PANTEQLAALLKTHDVHVDPTEVLTLEGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETIARPQDEATVQMAERRRLNRM
AERDVADWLYARFLNDKAGTDTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGEVVYKVTDVIDVTIAEVRMETRSIIARPAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggataacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgcgcggaaggggtcgttaagggcacggaaaagggctttggcttcctcgaagtggacgct
cagaagagctacttcattccgccgccgcagatgaaaaaagtgatgcatggcgaccgtatc
gtcgcggtgatccattctgaaaaagaacgcgaaagcgccgagccggaatcgctggttgag
cccttcctgactcgttttgtcggtaaagtccagaagaaagacgatcgcctcgctatcgtt
cctgaccatccgctgctgaaagacgccattccctgccgcgccgcccgcggcgttgagcac
gattttaaacagggtgactgggccgtcgccgagatgcgccgtcatccattaaaaggcgac
cgcggattttacgcggagttgacccagttcatcacttttagcgacgaccacttcgtccca
tggtgggtaaccctggcgcgccataatcttgagaaagaggcaccggacggcgtcgccacc
gagatgctcgacgaggggctgacgcgccgcgacctaaccgccctcgacttcgtcaccatt
gacagcgccagcaccgaagatatggacgatgcgttgtatgccgaatccactgctgatggc
aaactgctgctgacggtcgccattgccgacccgaccgcctggattgccgaaggcagcaag
ctggataacgccgcaaaagtgcgcgcctttaccaactatctgccaggcttcaacattcca
atgctgccgcgcgagctgtcggacgacctctgctccctgcgcgctaacgaagtgcgcccg
gtgctggcctgccggatgaccctggcggccgatggcaccatcgaagacaatatcgagttc
tttgccgccaccatcgaatcgaaagccaagctggcctatgacgacgtctctgactggctg
gaaggccgcggcagctggcagccggacagcgaggcgatcgcgcagcaaattacgctgctg
aaggacgtgtgccagcgtcgtagcgaatggcgtcagacccatgcgctggtgttcaaagac
cgtccggactaccgttttgttctcggcgaaaaaggcgaagtgctggatatcgtcgcggaa
ccgcgtcgcattgccaaccgcattgtcgaagagtcgatgatcgccgccaacatctgtgcc
gcccgcgttctgcgcgacaagctcggcttcggcgtttataacgttcataccggtttcgac
ccggcgaataccgagcagttggccgccctgctgaaaacccatgatgtgcacgtcgacccg
acggaagtgctcaccctggaagggttctgcaagctgcgccgggaactggacgctcagccg
accggtttcctcgacagccgcattcgccgcttccagtcgtttgcggaaatcagcaccgag
ccgggcccgcactttggtcttgggcttgaagcctatgccacctggacctcgccgatccgt
aagtatggcgacatgatcaaccaccgtctgctgaaagccatcattaaaggcgagaccatt
gcgcgtccccaggatgaagccaccgtgcagatggcggagcgccgtcgtctcaaccggatg
gccgagcgcgacgtcgccgactggctgtacgcccgtttcctcaacgataaagccgggacc
gatacccgcttcgcggcggagatcatcgacgtcagccgcggcgggatgcgcgtgcgtctg
gtggacaatggcgcggtcgcctttattccggccccgttcctccacgccgtgcgcgacgaa
ctggtgtgcagtcaggagaacggtaccgtgcagatcaaaggtgaagtagtctataaagtg
actgacgttatcgatgtcactatcgctgaagttcgcatggaaacccgcagcattattgcg
cgtccggcggtctga
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