Klebsiella pneumoniae blaNDM-1: FH42_22610
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Entry
FH42_22610 CDS
T03440
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
kpb
Klebsiella pneumoniae blaNDM-1
Brite
KEGG Orthology (KO) [BR:
kpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpb03400
]
FH42_22610
DNA repair and recombination proteins [BR:
kpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FH42_22610
Archaeal homologous recombinant proteins
FH42_22610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
ABC_tran
AAA_21
AAA_15
cobW
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIJ43414
UniProt:
A0A483IDU7
LinkDB
All DBs
Position
complement(4670662..4673799)
Genome browser
AA seq
1045 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR
LNKVSQSQNDLMTRDTAECLAEVEFEVKGIAYRAFWSQNRARNQPDGNLQAPRVELARCA
DGKILADKVSDKLEQTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPSDRAELLEELTGTE
IYGQISAMVYEQHKAARHALEKFEAQAAGIVLLTEAQQQALQESLQVLTDEEKALLAQQQ
SQQQQLQWLTRRDELAQQQQQAATRQQQARQALADAAPALAKLELAQPAAQLRPLWERQQ
EQTAGLTQTRQRISEVNARLLASTALRARIRQGALRAQQQRQAELADLAQWLAAHERFRL
WGQEIAGWRAQFSQLTRDKQQLTAQSTRLAALRQKLATLPASPLTLSADEVAAAIEQQTQ
SRPLRQRLISLHEQHQLLRKRLRQNAESVQQAQAEQVKLNATLTLRREQYKDKNQHYLDL
KALCQREETIKDLESYRDRLEAGKPCPLCGACEHPAIEQYASLTLTDNQRRRDALEKEAA
ALKEEGLLILGQVKALTQQLQRDTEAAGRLVEEEQALTKAWQETCDSLHIARDIAQEIND
WMQEQERYEQQLYQLSQRLMLQSQLNDQQALERQAEQQLAATRQGLESALQALALSLPAE
GTEAAWLHARESEFAQWQAQQTQHDAIQQQIAALRPLLETLPTSDETEVEAESAIPDNWR
EIHEECLSLHSQLVAQQQQETQEKARLDQSQAQFTSALAASRFSDREAFLAALLDDETAQ
RLTQLKQTLEQQLQQAAALCEQATRQHEAHLALRPQGVDADVPTLQTQLHALAQRLRDNT
TRQGEIRQQLRQDAESRQQQQALGQQIAEAAQLADDWGYLNSLIGSSTGDRFRKFAQGLT
LDNLVWLANQQLNRLHGRYLLQRKASEALELEVVDTWQADAVRDTRTLSGGESFLVSLAL
ALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKIIGVISHVEAMKDR
IPVQIKVKKINGLGYSRLDKAFAVE
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagtctgcgtctgaaaaacctcaactccctgaaaggggaatggaagata
gactttaccgccgagccgttcgccagcaatggcctgttcgccattaccggcgccaccggg
gccgggaaaaccacgctgctcgatgccatttgcctggcgctctatcatgaaacgccgcgc
ctgaataaagtctcccagtcgcaaaacgacctgatgacccgcgataccgccgagtgtctg
gcggaagtcgaatttgaagtaaaaggcatcgcctaccgcgctttctggagccagaaccgg
gcccgtaaccagccggatggcaatctgcaggcgccccgcgtcgagctggcgcgctgcgct
gacggcaaaatcctcgccgataaagtctcggacaagctggagcaaaccgcgacgcttacc
ggcctcgactatggccgcttcacccgctcgatgctgctttcccaggggcaatttgccgcc
ttcctgaacgcgaagccgagcgatcgcgcggagctgctggaggagctgaccggcacggaa
atctacggccagatttcagccatggtctacgaacagcacaaagccgctcgccatgcgctg
gagaagttcgaagcccaggcggcgggcatcgtcctgttgacggaggcccagcagcaggcg
ctgcaggaaagtttgcaggtacttactgacgaagaaaaagccctgctggcccagcagcag
agccagcagcagcagctccagtggctgacccgccgcgacgagctggcgcagcaacagcag
caggccgccacccggcagcagcaggcccgccaggcgctggcggacgccgccccggcgctg
gcgaagcttgagctggcccagcccgccgcccaactgcgtcccctgtgggagcgccagcag
gagcagacggcaggcctgacgcaaacccggcagcggatcagtgaagtaaatgctcgctta
cttgccagcacggcgctgcgcgcgcgcatccgccagggcgccttgcgcgctcagcagcag
cgtcaggctgaactggccgatctggcgcagtggctggccgcccatgagcgtttccgctta
tggggtcaggagatcgccggctggcgagcgcaattctcgcaactgacgcgggataaacaa
cagctaacggctcagagcacccgcctggccgcgctacgccagaagctggccacgctgcca
gccagccctctcaccctgagcgcagatgaagttgccgcagcgatagaacagcaaacccaa
tcgcggccgctgcgccagcgcctgatctccctgcatgagcagcaccagctgctgcgcaag
cgtctgcgccagaacgccgagagcgtccagcaggcgcaggcggagcaggtaaaacttaac
gctaccctgacgctgcgccgggaacaatataaagacaaaaaccagcactatctcgacctg
aaggcgctctgccagcgggaagaaacgattaaagacctggaaagctaccgcgaccggctc
gaggcgggtaagccctgtccgctgtgcggcgcctgtgaacacccggcgattgaacaatac
gcctcgttgacgctcacggataatcagcgccgccgcgatgcgctggaaaaggaggccgcc
gcgctgaaagaagaaggcctgctgatcctcgggcaggtcaaggccctgacgcaacagctc
cagcgtgacaccgaagcggccgggcggctcgtagaggaagagcaagcgcttactaaagcg
tggcaggagacctgcgactctctgcacatcgcgcgggatattgcgcaagagataaacgac
tggatgcaggagcaggagcgctacgagcagcagctctatcagctcagccagcgcctgatg
ttgcagagtcagcttaacgatcagcaggcgctggagcgccaggccgagcagcagctggcg
gccacgcgccagggactggagagcgccctgcaggccctggccctgagcctgccggcagaa
gggacagaagccgcctggctgcacgctcgcgaaagcgaatttgcccagtggcaggcgcaa
cagacccaacatgatgccattcagcagcaaatcgctgctctgcggccactgctggagacg
ctgccgaccagcgacgagacagaggttgaagctgagtcggccatcccggacaactggcgc
gaaatccacgaggaatgcctgtcgctgcacagccagcttgtcgcccagcagcagcaggaa
acccaggaaaaggcgcgtctggaccagtcgcaggcgcaattcacctccgccctggccgcc
agccgctttagcgatcgggaggcgttcctcgccgcgctgctggatgacgagaccgcccag
cggctgacgcagttaaaacagacgctggagcagcagcttcagcaggcggccgcgctctgc
gagcaggcgacccggcaacatgaggcgcacctggcgctgcgtccgcaaggggtggacgct
gacgtccccaccctgcaaacccagctgcacgccctggcccagcggctgcgggataacact
acccgccagggtgagatccgccagcagctcaggcaggacgcagagagccgtcaacagcag
caggcgctggggcagcagattgcagaggcggcgcagctggcggacgactggggctatctc
aattcgctgatcggctccagcaccggcgaccggttccgcaaattcgcccaggggctgacg
ctggataatctggtctggctggcaaaccagcagctcaaccgcctgcatggccgctatctg
ctacagcgcaaggccagcgaggcgctggagctggaggttgtcgatacctggcaggccgac
gccgtgcgcgacacccgcaccctctccggcggcgaaagtttcctcgtcagcctggcgctg
gccctggcgctgtcagacctggtgagccataagacgcggattgactccctgtttcttgat
gaaggcttcggcaccctcgacagcgaaacgctggacacggcgctggacgccctggatgcc
cttaacgctagcggtaagattatcggggtgatcagccacgtggaggcgatgaaagaccgc
attccggtgcagatcaaagtgaagaagattaacggcctgggctatagccggctggacaaa
gcgtttgcggtggagtga
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