Klebsiella pneumoniae subsp. pneumoniae KPNIH10: KPNIH10_20830
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Entry
KPNIH10_20830 CDS
T03788
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
kpc
Klebsiella pneumoniae subsp. pneumoniae KPNIH10
Brite
KEGG Orthology (KO) [BR:
kpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kpc03016
]
KPNIH10_20830 (truD)
Enzymes [BR:
kpc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
KPNIH10_20830 (truD)
Transfer RNA biogenesis [BR:
kpc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KPNIH10_20830 (truD)
Prokaryotic type
KPNIH10_20830 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AIA38306
LinkDB
All DBs
Position
complement(4268821..4269870)
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AA seq
349 aa
AA seq
DB search
MIAFDQLTWLHGKPQSSGLLKANPEDFLVVEDLGFAPDGEGEHVLVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSKFQLEGCQVLEYARHKRK
LRLGALKGNQFTVILREISDRQDVETRLQAIAERGVPNYFGAQRFGIGGSNLQGAMRWAE
SGAPVRDRNKRSFWLSAARSALFNQQVSIRLKKTEFNQVVDGDALQLAGRGSWFVVTPEE
LEVSQARVHNRELMITATLPGSGDWGSQRDALAFEQAAIAEETALQALLVREKVEAARRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTTGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcctttgaccaactgacctggctgcacggcaaaccgcagagcagtgggctactg
aaagccaatccggaagattttctggtggtggaagatctgggctttgccccggacggcgaa
ggcgaacacgtgctggtgcggatcctgaaaaacggctgcaatacgcgctttgtcgccgac
gcgctggcgaaattccttaagatccacgcccgtgaagtgagcttcgccgggcaaaaggat
aagcacgcggtcaccgagcagtggctgtgcgcccgggtgcccggcaaagagatgccggac
ctgagcaaatttcagctcgagggctgccaggtactggaatatgctcgccataagcgtaag
ctgcgtttaggcgcgctgaaaggcaaccagtttaccgtgatcctgcgcgagattagcgat
cgccaggacgtggagacgcgtctgcaggccatcgctgaacggggagtgccgaactatttc
ggcgcgcagcgctttggcattggcggcagtaacctgcagggcgccatgcgctgggcggag
agcggcgcgccagtgcgcgatcgcaataagcgcagtttttggttgtcggcagcccgcagc
gcgttgtttaatcagcaagtgagtattagattaaaaaaaacggaatttaatcaggtcgtt
gatggcgatgcgctacaattagcggggcgcgggagctggtttgtcgtcacaccggaagaa
ctcgaggtttcgcaggcgcgggtgcataaccgcgaactgatgattacggccacgctgccg
ggcagcggcgactggggaagccagcgcgacgccctggctttcgagcaggccgcgatcgcc
gaggaaaccgcgttgcaggcgctgctggtacgggagaaagtcgaggcggcgcgccgggcg
atgcttctctatccacagcagctcagctggaactggtgggatgacgtaaccgttgaactg
cgtttctggctgccggcgggcagcttcgccaccagcgtggtcagggagcttatcaataca
acgggtgactatgcgaatattgctgagtaa
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