Kangiella profundi: CW740_03865
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Entry
CW740_03865 CDS
T05254
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
kpd
Kangiella profundi
Brite
KEGG Orthology (KO) [BR:
kpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kpd03009
]
CW740_03865
Enzymes [BR:
kpd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CW740_03865
Ribosome biogenesis [BR:
kpd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CW740_03865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
RrnaAD
Cons_hypoth95
Methyltransf_23
PCMT
Methyltransf_11
Methyltr_RsmB-F
Methyltransf_15
TRM5-TYW2_MTfase
Ubie_methyltran
Methyltransf_12
PrmA
Methyltransf_4
DREV
UPF0020
Methyltrans_SAM
TPMT
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
AUD78432
UniProt:
A0A2K9ALC2
LinkDB
All DBs
Position
806413..807759
Genome browser
AA seq
448 aa
AA seq
DB search
MARRRRRKPLPTEPVRASIHAFSHEGRGICSVEGKTVFVDNALKGEEVSFQYTEKRGKFD
EGVAIEIHSASEDRVTPPCEHADICGGCSLQHMSNPAQINHKQNVLVEQFEHFGGYSHKN
GDYELVEPLQADVLGYRRKARLGVKYVPKKGGALVGFREKRSNFLANIDSCVVLDPRVGQ
LITPLKNMISELDSNDKTAQLEVAMGDDQVALVVRHLVPLTEKDQNLWIEFGKEHGLYIY
LQPKGPDTVHLLYGPDTRDWLSYRFDDYDVEMLFHPMDFTQVNASINQKMVKRAIEWLEP
KAEDRILDLFCGLGNFTIPLATQAQNVVGVEGSEAMVERGQMNAKHNNLSNVEFHATNLQ
DDFTQEEWAQQGFNKILIDPPRSGALDVVQNITRFNPERIVYVSCNPATLARDAGELKER
GYKLVKAGVMDMFPHTSHTESIALFEMI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaagacgtcgtagaaagccgttaccgaccgaacccgtacgagcaagcatccat
gccttttcccacgaagggcgtggcatctgtagcgtagaaggcaaaacggtttttgtagac
aacgcccttaaaggcgaagaagtatccttccaatacactgaaaagcgcggcaagttcgat
gaaggggttgccattgagattcacagcgcttctgaggatcgggtaactccgccttgtgaa
catgcggatatttgtggtggttgcagtctgcaacacatgagcaatcctgcccagataaac
cacaagcaaaatgtgctggtcgagcaattcgagcacttcggtggctattcgcacaaaaat
ggtgattatgagctggtcgagccattgcaggcagacgttctgggttatcgtcgtaaggca
cgtcttggtgtgaaatatgtgcctaaaaaaggtggagcattggtaggctttcgtgaaaaa
cgcagtaacttcctggctaatatcgattcatgtgtagtactcgatccaagggtcggccaa
ctgatcacacctctaaaaaacatgatcagtgaactggacagcaatgataaaacggctcaa
ctggaagttgccatgggcgatgaccaggtcgcattggttgttcgtcatctggttccgtta
accgaaaaggatcagaacctctggatcgaattcggtaaagagcatgggctctatatctat
ctgcaaccgaaaggtccggataccgttcatttgctctatggcccagacacgcgtgactgg
ctgtcgtatcgttttgatgattatgatgtagaaatgctgttccacccgatggattttact
caggtcaacgccagcattaatcagaaaatggtcaagcgcgccatcgagtggctcgaaccc
aaagcagaagaccgtattcttgatttattctgtggtctcggcaacttcaccattccatta
gctactcaggcacaaaatgtggttggtgttgaaggcagcgaagccatggttgagcgcgga
cagatgaatgccaagcacaataatctaagcaacgttgagtttcatgccaccaatttgcaa
gatgacttcacccaggaagaatgggcgcagcagggtttcaataaaatactgatcgacccg
cccagaagtggcgcactagatgtagtgcaaaacattacccgttttaatccagaacgaatt
gtctatgtatcctgcaacccggcaacactagcgcgcgatgcaggagagttgaaggagagg
gggtataagctggtgaaggcgggggttatggatatgtttccgcatacttcccatactgaa
tccatcgctctttttgaaatgatctag
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