Kangiella profundi: CW740_05130
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Entry
CW740_05130 CDS
T05254
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
kpd
Kangiella profundi
Pathway
kpd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
kpd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CW740_05130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
kpd02022
]
CW740_05130
02035 Bacterial motility proteins [BR:
kpd02035
]
CW740_05130
Two-component system [BR:
kpd02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
CW740_05130
Bacterial motility proteins [BR:
kpd02035
]
Pilus system
Twitching motility proteins
CW740_05130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
HTH_8
Sigma54_activ_2
AAA_lid_14
FleQ
HTH_28
VpsR
HTH_50
HTH_23
MerR
Motif
Other DBs
NCBI-ProteinID:
AUD80052
UniProt:
A0A2K9AQZ4
LinkDB
All DBs
Position
complement(1085495..1086823)
Genome browser
AA seq
442 aa
AA seq
DB search
MNQNKPKVLVIDDEADIRHLLTMTLIQMGLDVSSSKDLTDAKKQLSEEQFHFCLTDLKLP
DGNGLDFVKYVRKQYPHMPIAVITAFGSTDNAIEAMKLGAFDFLAKPIDLSHLRQLLKHA
FKYVDGKQVEPQAPFTFLAGSSEAINKLREKMVKIRGSQAPIVIEGEKGTEKERLAQILH
EQSSRSDQAEVFLDCSSEEQEELEHLLFNKDEQHDCLLFQANNSTLILSNIQNLSIITQK
KLLHAIEQKKFPIESEHSDQPMDIRIIICTEKPLIDYVHTHQLRDDLFFRLNVIQLKIPS
ITQRLSDLDILIDSYLEELSDGKKISTDARDVLKNYEFPFNYRELENILEKACALSESDT
IEASDLIMAQGDEIESTKPRQEQVKSGFSRGDLPLDQFIEKIEKAEIEKALNETRWNRTE
AAKLLGITFRTIRYKMKKLGIE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaataaacccaaagttctagtcattgacgatgaagcagatatcagacacctg
ctgacaatgacattaattcaaatgggacttgatgtttcaagcagtaaagatttgactgat
gcaaaaaagcaactgtctgaagaacaattccatttttgtcttaccgatttgaaactaccg
gatggcaacggtctcgactttgttaagtatgttcgaaagcaatatcctcacatgccaatt
gccgtaatcacagcttttggcagtaccgataacgcaattgaggccatgaaactcggcgca
ttcgacttcctggcaaagccaattgacttgtcacatttacgccaattattgaagcacgca
ttcaaatacgttgatgggaagcaggttgaaccgcaggcgcccttcacatttcttgctggc
agtagcgaagccataaacaaattaagagaaaagatggtcaagatcaggggctcgcaagct
ccgatagttattgagggtgaaaaaggcacagaaaaagaacgactagcacagatccttcac
gagcaaagctcacgctccgatcaggcagaagtctttttagattgctccagcgaagaacag
gaagaactcgagcatctactctttaataaggatgaacagcatgattgcctgctgtttcag
gcaaacaacagcacattaattttaagcaacatccaaaacctttcgataataactcagaaa
aagttgctgcatgccatcgagcaaaagaagtttcccattgagtctgagcattctgatcag
ccaatggatattcgcattataatatgcactgagaagccattaattgattacgttcatacc
caccaattgagggacgacctcttctttaggttaaatgtaatacaacttaaaatcccgtcg
attactcaaaggctatctgatttagatatactgatagacagttatctggaagagttatca
gatggcaaaaaaattagcactgatgcgagagacgtgctgaaaaactatgagtttcctttt
aactacagagaacttgaaaacatcctggaaaaagcctgtgcactctctgaatcggacacc
atagaagcgtcagaccttattatggctcagggtgatgaaattgaatcaactaagccacgc
caggaacaggttaagtcaggttttagtcgcggtgatcttcctcttgatcagtttattgaa
aaaattgaaaaagctgaaatcgaaaaagcgctcaatgaaactcgctggaacagaacagaa
gctgcgaagttattgggcataacctttagaaccattcgttataagatgaaaaaactaggt
atcgaatag
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