Kangiella profundi: CW740_05605
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Entry
CW740_05605 CDS
T05254
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
kpd
Kangiella profundi
Pathway
kpd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CW740_05605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpd03019
]
CW740_05605
03009 Ribosome biogenesis [BR:
kpd03009
]
CW740_05605
Enzymes [BR:
kpd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CW740_05605
Messenger RNA biogenesis [BR:
kpd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CW740_05605
Ribosome biogenesis [BR:
kpd03009
]
Prokaryotic type
rRNA processing factors
CW740_05605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AUD78754
UniProt:
A0A2K9AIK5
LinkDB
All DBs
Position
complement(1198134..1200938)
Genome browser
AA seq
934 aa
AA seq
DB search
MLINATNHHEELRVALVDGQRLYDLDIELAGREQKKGNIYKGKVTRIEPSLEAAFVDYGA
ERHGFLPLKEVAREYMHNAPSRGRPTIKDALKEGQEIIVQIDKEERGNKGAALTTSISLA
GSYLVLMPNNPRAGGISRRIEGEERAELKQVMSQLPVPNGMGCIVRTAGIGKSLEEIQYD
FNYLIDTWNGIKQVAGTRPAPFLITQESDVITRAIRDYLRPDIGEIIIDRQEVYERVKTE
LQYQRPDFVNKVKLYRDEIPLFNRYQVESQIESAFQREVRLPSGGSVVFDQTEALLSIDI
NSARATKGGDIEETALHTNVEAAEEIARQLRLRDIGGLIVIDFIDMGPPRNQREVERVLK
ESVARDRARIQIGRISRFGLLEMSRQRLRPSLEESSQHVCPRCTGSGVIRGTDSLALSIL
RLMEDEAMKESTAEVQALVPVEVATFLLNEKRRKIEQIEKRQKVRLVVVPNPYLETPHYE
VLRVKAGETLEDASYSLIGDAPQIELVRSSTQAAPASDQPALKGVKPTTPPPAPSKPAKK
KKPGLLKRLWNALFGDDKDKKKKGKKSQNNRGKYDRNNRGRNNRYQGKKRNNQKGRNQNR
NQQQDQRDDKDKPQQKSGGRTQKKQHDKPQRKQQAAQKQEQKHGQKQEQQQEAKRPPRKT
RAERMAEAQQGNKQAQEQQSAPNKEQAQQQKKPSVRSAIKGKQAQAEFAESKPAAKQGKT
GNEKPAKERTPKSKAQAEDIMVYKAHKSLERSITEVMGYSKDKKSGKVESSAPAQQAAND
SSIEQSTSAKPQAAPEQVKAEPTAKKLDVETVEPFVNKDVEVANEKPQSNSGSQQEANKT
EPSSKDDNIDKTNASEAEPDSSQSTEKLVAKKHESTHASAPMAKAVTTDTVVSATFTPKP
YQFSDSDVITSNIEDNSDKHSNSPAAKTSSLSDS
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgttgattaacgcaacgaatcatcatgaagagttgcgtgttgcgctggttgatggccag
cgtttgtatgatttagatatcgaactggcaggaagagaacagaaaaaaggtaacatttac
aaaggtaaggtcactcgaatcgagccaagccttgaagccgcttttgttgactatggcgca
gaacgtcatggcttcctaccactgaaagaagttgcccgcgagtatatgcacaacgcccct
tcgcgtggccgccctaccattaaagatgcccttaaagaaggccaggaaatcatcgttcag
attgataaagaagagcgtggcaataaaggcgcagccttaaccacctcaatcagtctggcc
ggaagttacctggtactaatgccaaataatcctcgcgctggcggtatttcgcgccgtatc
gaaggcgaagagcgcgctgaacttaagcaggttatgagccagcttcctgtaccaaacggt
atgggctgcatcgttcgtaccgctggtattggcaaaagccttgaagaaatccaatacgat
ttcaactaccttattgatacctggaatggcattaaacaagttgctggcactcgccctgct
cctttcttaattactcaggagtcggacgttatcactcgagcgatccgcgactatttgcgt
cctgatattggtgaaatcatcattgatcgccaggaagtctatgagcgtgtaaaaactgaa
ctacagtatcagcgtcctgattttgtaaacaaagttaagctatatcgcgacgaaatccca
ttatttaatcgctatcaggtagaaagccagatcgaaagcgccttccaacgcgaagttaga
ctgccatcaggtggttctgtagtctttgaccagactgaagctctattatcaatcgatatt
aactctgcccgcgcaaccaagggtggtgatattgaagaaactgcgttgcacacaaacgta
gaagccgccgaagaaatagcccgccaattacgtctgcgtgatattggtggcttgattgtt
atcgactttattgacatgggcccgccacgcaatcaacgtgaagttgagcgtgtcctaaaa
gaatctgttgctcgtgatcgtgcaagaattcagattggccgtatttctcgctttggtttg
ctagaaatgtctcgtcaacgcttgcgtccttcattagaagagtcaagccaacacgtctgt
ccgcgttgtaccggctcgggtgttattcgtggtactgattcactggccctttctattctt
cgcttaatggaagacgaagcgatgaaagagtctaccgcagaagttcaggctctagttcca
gtagaagttgcaacattcctgttgaatgaaaagcgtcgaaaaatagagcaaatcgagaag
cgtcaaaaagttcgcctggttgtggttccaaacccttacctggaaacgcctcattatgaa
gtgttgcgcgttaaggctggagaaacattagaagatgccagttatagtctaattggcgat
gctcctcagattgaacttgtaagaagcagcactcaagctgctcctgcaagtgatcagcca
gcactaaaaggcgttaaaccaacgactccaccgccagcaccaagcaaaccagctaagaag
aaaaagcctggtctgttaaaaagactttggaacgctttgttcggcgacgataaagataag
aaaaagaaaggcaagaaatcacaaaataaccgtggtaaatacgaccgcaataatcgtggc
cgtaacaatcgctatcagggcaaaaagcgtaacaaccagaaaggtcgtaatcaaaaccgc
aatcagcagcaagatcagcgggatgataaagataagccgcaacagaaatctggtggtcgc
acacagaagaaacagcatgacaagccacaaagaaagcaacaggccgctcagaaacaagag
cagaagcatggacagaaacaagagcaacagcaagaagctaagcgtccaccacgtaaaaca
cgtgcagagcgtatggctgaagctcagcaaggtaataagcaggctcaggagcaacaatca
gctcctaacaaagagcaagctcaacagcagaaaaagccttcagttcgttcagctataaag
ggtaaacaagctcaggctgaatttgcggagagcaagccggctgcaaagcaaggtaaaact
ggtaatgagaaacctgcaaaagaacgcactcctaagagtaaagctcaagcagaagacatt
atggtttataaagcccataaatccttggagcgcagtattactgaggttatgggttactca
aaagacaaaaagtctggcaaagtagaatcaagtgctcctgcacaacaggcagcaaatgac
tcgagtattgagcagtctacttcagctaagcctcaagcagcacctgagcaagtaaaagct
gagccgactgcaaaaaaactagatgtagaaacagttgagccatttgtgaataaagatgtt
gaagtagcaaatgagaaacctcaatcaaactctggcagccagcaagaagctaataagact
gaaccatcttctaaagatgataatattgacaaaactaatgcatctgaagcagagccggat
tctagccaatcaactgaaaagttggttgctaagaaacatgaatccactcatgcttcagcg
ccaatggcaaaagctgtaactacagatacagtggtatctgcaacattcactccaaagcct
tatcaattctcagatagtgacgttatcacttctaacattgaagacaatagtgataagcac
agcaacagcccagcagctaaaaccagctctttgagtgattcgtaa
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