Kangiella profundi: CW740_08410
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Entry
CW740_08410 CDS
T05254
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kpd
Kangiella profundi
Pathway
kpd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CW740_08410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpd03019
]
CW740_08410
Enzymes [BR:
kpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CW740_08410
Messenger RNA biogenesis [BR:
kpd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CW740_08410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AUD79265
UniProt:
A0A2K9A5Z4
LinkDB
All DBs
Position
complement(1797895..1799223)
Genome browser
AA seq
442 aa
AA seq
DB search
MTFSKLNLIQPLLNALHKSGYETPSPIQEKVIPLILVGRDVMAAAQTGTGKTAGFSLPML
QRLSEGDRPSSNSARCLILTPTRELAEQVHQSVQKYAANLALNSVVAYGGVNINPQMLKL
RRGTDVLVATPGRLLDLFEKNAVRFNELEFLVLDEADRMLDMGFLPSIKRIISKLPKQRQ
TLLFSATFSDSIKALSQQFLSNPILVETGPTNRTATTIEQWIHPVDKKQKPALLSYLIGH
NQWQQLLIFVRTRRGANKLSTELEKRGIKSTAIHGGKSQGARNRALAEFKAGQVTTLVAT
DVAARGLDIEQMPLVINYDLPDVAEDYVHRIGRTGRAGEKGTAISLVSADEVDNLSAIQN
LIRKQLERKVIDDFEPQHALPQTALKPLKKKKPHKKKLAKAKLKQPKSQPNSQARAQANK
GQSKPKSRKKKTGGRSPKQDKT
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaccttttccaaacttaatttaatacagcctttgctcaacgctttgcataaaagcggc
tatgaaactccgtcgccgatacaggagaaggtgatccctttgattctagttggtcgcgat
gttatggccgctgcgcaaactggaacgggtaaaaccgcaggtttttcgttaccgatgctg
caaagactctctgaaggggacagaccgtcttccaactctgcccgttgcctgattttgaca
ccgacaagggaactggcggagcaggttcatcaaagtgtacaaaagtatgcggcaaatctg
gcgttaaattcagtggtcgcttacgggggcgtaaatattaatccacagatgttaaaactg
cgtcgtggcaccgatgttttagtagcgacccccggcaggttgttagatttgttcgagaaa
aacgcggtgcgtttcaacgaactggagtttcttgttttggatgaagccgaccggatgctg
gatatgggctttcttccgagtatcaaacgcatcatcagcaagcttcccaagcaacgtcaa
accctgctgttttctgcaactttttcagactcaatcaaagcgttaagtcagcagtttctt
tccaatccaatattagtcgagactgggccgaccaataggacagcgacaactatcgagcag
tggattcatccagtagacaagaaacagaagccagccttactgagctatcttattggccat
aaccaatggcaacagctgttaatcttcgtaagaacgcgaagaggagccaataaacttagc
actgagcttgaaaaaagaggcataaaatccacagccatacatggtgggaaaagtcagggt
gcgcgcaatagagctcttgcagaatttaaagcagggcaagtgacgactttagttgctacc
gacgttgctgcacgaggactggatattgagcagatgcctttggtcatcaactatgatttg
ccagatgttgctgaagattatgttcaccgtattggccgaacaggacgcgcaggtgaaaaa
ggtacggctatttctctggttagtgcagatgaagtcgataacctgagtgcaatccagaac
cttattcggaaacagctggaaaggaaagttatagacgatttcgagcctcagcatgcgtta
ccacaaaccgcattaaaaccgctgaaaaagaaaaagccgcataaaaagaagttggcaaaa
gccaaactcaaacagcctaagtctcaacctaactctcaagctagggctcaggcgaataaa
ggtcaaagtaaacctaaatctcggaaaaagaagaccggaggtcgcagtccaaaacaggat
aagacataa
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