KEGG   Kangiella profundi: CW740_08410
Entry
CW740_08410       CDS       T05254                                 
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
kpd  Kangiella profundi
Pathway
kpd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kpd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CW740_08410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kpd03019]
    CW740_08410
Enzymes [BR:kpd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CW740_08410
Messenger RNA biogenesis [BR:kpd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CW740_08410
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 P-loop_SecA
Other DBs
NCBI-ProteinID: AUD79265
UniProt: A0A2K9A5Z4
LinkDB
Position
complement(1797895..1799223)
AA seq 442 aa
MTFSKLNLIQPLLNALHKSGYETPSPIQEKVIPLILVGRDVMAAAQTGTGKTAGFSLPML
QRLSEGDRPSSNSARCLILTPTRELAEQVHQSVQKYAANLALNSVVAYGGVNINPQMLKL
RRGTDVLVATPGRLLDLFEKNAVRFNELEFLVLDEADRMLDMGFLPSIKRIISKLPKQRQ
TLLFSATFSDSIKALSQQFLSNPILVETGPTNRTATTIEQWIHPVDKKQKPALLSYLIGH
NQWQQLLIFVRTRRGANKLSTELEKRGIKSTAIHGGKSQGARNRALAEFKAGQVTTLVAT
DVAARGLDIEQMPLVINYDLPDVAEDYVHRIGRTGRAGEKGTAISLVSADEVDNLSAIQN
LIRKQLERKVIDDFEPQHALPQTALKPLKKKKPHKKKLAKAKLKQPKSQPNSQARAQANK
GQSKPKSRKKKTGGRSPKQDKT
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgaccttttccaaacttaatttaatacagcctttgctcaacgctttgcataaaagcggc
tatgaaactccgtcgccgatacaggagaaggtgatccctttgattctagttggtcgcgat
gttatggccgctgcgcaaactggaacgggtaaaaccgcaggtttttcgttaccgatgctg
caaagactctctgaaggggacagaccgtcttccaactctgcccgttgcctgattttgaca
ccgacaagggaactggcggagcaggttcatcaaagtgtacaaaagtatgcggcaaatctg
gcgttaaattcagtggtcgcttacgggggcgtaaatattaatccacagatgttaaaactg
cgtcgtggcaccgatgttttagtagcgacccccggcaggttgttagatttgttcgagaaa
aacgcggtgcgtttcaacgaactggagtttcttgttttggatgaagccgaccggatgctg
gatatgggctttcttccgagtatcaaacgcatcatcagcaagcttcccaagcaacgtcaa
accctgctgttttctgcaactttttcagactcaatcaaagcgttaagtcagcagtttctt
tccaatccaatattagtcgagactgggccgaccaataggacagcgacaactatcgagcag
tggattcatccagtagacaagaaacagaagccagccttactgagctatcttattggccat
aaccaatggcaacagctgttaatcttcgtaagaacgcgaagaggagccaataaacttagc
actgagcttgaaaaaagaggcataaaatccacagccatacatggtgggaaaagtcagggt
gcgcgcaatagagctcttgcagaatttaaagcagggcaagtgacgactttagttgctacc
gacgttgctgcacgaggactggatattgagcagatgcctttggtcatcaactatgatttg
ccagatgttgctgaagattatgttcaccgtattggccgaacaggacgcgcaggtgaaaaa
ggtacggctatttctctggttagtgcagatgaagtcgataacctgagtgcaatccagaac
cttattcggaaacagctggaaaggaaagttatagacgatttcgagcctcagcatgcgtta
ccacaaaccgcattaaaaccgctgaaaaagaaaaagccgcataaaaagaagttggcaaaa
gccaaactcaaacagcctaagtctcaacctaactctcaagctagggctcaggcgaataaa
ggtcaaagtaaacctaaatctcggaaaaagaagaccggaggtcgcagtccaaaacaggat
aagacataa

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