Kangiella profundi: CW740_12070
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Entry
CW740_12070 CDS
T05254
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
kpd
Kangiella profundi
Brite
KEGG Orthology (KO) [BR:
kpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpd03021
]
CW740_12070 (rpoH)
Transcription machinery [BR:
kpd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CW740_12070 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
KORA
Sigma70_r1_2
HTH_Tnp_ISL3
UCR_14kD
HTH_10
HTH_3
GntR
Motif
Other DBs
NCBI-ProteinID:
AUD79948
UniProt:
A0A2K9B4U8
LinkDB
All DBs
Position
2583937..2584788
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AA seq
283 aa
AA seq
DB search
MSNIPMNMALAVPTGSIDGYISTVSAIPVLSVEEEQKLAYQFHDHNDLEAARQLVMAHLR
FVVHIARSYSGYGLPQADLIQEGNIGLMKAVKRFDPSVGVRLVSFAVHWIKAEIHEYVLR
NWRIVKVATTKAQRKLFFNLRSKKKTLNWLNNDEINAVAQDLGVSEEEVRRMEGRLNAHD
ASFDAPHASDDDDAVYAPVHYLESPNSDPAVAIEQEDWQDQRETRLLSALKTLDERSQDI
LQQRWLNDQKATLHDLADKYGVSAERIRQLEKNAMNKIKNAIS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatattccaatgaacatggcgttagccgttccaacaggcagtattgatggttat
atcagtaccgtcagtgctattcctgtcctttccgttgaagaagaacaaaaattagcatat
cagtttcatgaccataacgaccttgaagctgcccgccagttagtaatggctcacttacgc
tttgtggtacatattgcaagaagttatagtggttatggtttgccacaggccgatttaatc
caagaaggtaatattggcctgatgaaagcagttaagcgctttgatcctagcgttggcgtg
cgtctagtgtcctttgctgtacactggattaaagccgagatccacgaatatgtattgcgt
aactggcgaattgtcaaagttgcaaccacaaaggcgcaacgcaaattattctttaatcta
cgctctaaaaagaaaaccttaaactggcttaacaatgatgaaatcaatgcagtcgctcag
gatctaggggtaagcgaagaagaagtcagacgtatggaagggcgcctgaatgcccatgat
gcttcatttgatgcaccacatgccagcgatgacgatgatgcagtgtatgctccggttcat
tatcttgagtcaccaaactccgatccggcggtagccattgaacaggaagattggcaggat
cagcgtgaaactcgactactatctgccttgaaaactctggatgaaagaagccaggatatc
ttgcaacagcgctggctaaatgaccaaaaagcaactttgcatgatttagcagataaatat
ggtgtttcagctgagcgtattcgtcagcttgagaaaaacgccatgaataaaatcaagaat
gctattagctaa
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