Kangiella profundi: CW740_12185
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Entry
CW740_12185 CDS
T05254
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kpd
Kangiella profundi
Pathway
kpd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CW740_12185 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpd03021
]
CW740_12185 (rho)
03019 Messenger RNA biogenesis [BR:
kpd03019
]
CW740_12185 (rho)
Transcription machinery [BR:
kpd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CW740_12185 (rho)
Messenger RNA biogenesis [BR:
kpd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CW740_12185 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
AAA_22
Fungal_virus_P2_C
AAA
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AUD79971
UniProt:
A0A2K9AXU1
LinkDB
All DBs
Position
complement(2606807..2608063)
Genome browser
AA seq
418 aa
AA seq
DB search
MNLTELKQKSAQELSEMAKAVGLDHMARMRKQDIIFGLLKNHAKSGEDIFGGGVLEILPD
GFGFLRSAEGSYLAGPDDIYVSPSQIRRFNLRTGDTIFGKIRPPKDGERYFALLKVAEIN
YDSPENSRNKLLFENLTPLHPDERMRMERGNGSTEDITARVIDLAAPIGKGQRALIVSPP
KAGKTMMLQNIAQSITSNHPECMLIVLLIDERPEEVTEMQRSVKGEVVASTFDEPAARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDF
NRSGSRKEDLLTGSEELQKMWILRKILHPMDEIDAIEFLIDKMAMTKTNDEFFDAMKR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaatctaactgaattaaagcaaaagtcagctcaagagctgtctgaaatggcgaaagcc
gttggtctcgaccatatggcgcgtatgcgcaaacaagacattatcttcggtctattaaag
aatcacgcgaaaagcggcgaagatatttttggtggtggagttctcgaaatccttcccgac
ggttttggtttcctacgctcagcagaaggctcatacctggctggtcctgatgatatctat
gtttccccaagccaaataagacgctttaacttgcgaacgggcgataccattttcggcaaa
attcgcccaccgaaagacggtgaacgctattttgccctcctgaaagtcgcagaaattaac
tacgacagccccgaaaactctcgcaacaaacttctctttgaaaaccttaccccactccac
ccagacgaacgtatgcgtatggagcgtggtaatggttcgaccgaagacattacggctcga
gttatcgatctggcagctcctatcggtaaaggtcagcgcgcacttatcgtgtcaccgcca
aaagccggtaaaaccatgatgttgcagaatatcgcgcagtcgattaccagcaatcatcca
gagtgtatgttgatcgttcttctgatcgatgagcgaccagaggaagtgaccgaaatgcag
cgctcggtaaaaggtgaagtggttgcttcaacctttgatgagccagcagcacgtcacgtt
caggtagccgaaatggttatcgaaaaagccaaacgtctggttgagcacaagaaagacgtg
gttattctcctggactcgattacacgtctggcccgtgcttataacaccgtggttccatca
tcaggtaaagtcttaaccggtggtgttgatgccaatgccttgcaacgtcccaaaagattc
tttggtgcagcgcgtaatatcgaagaaggtggcagcttaaccattatcgctactgcacta
gtagacacgggctccaaaatggacgaagtaatctacgaagaatttaaaggtaccggtaac
atggaattgcacctgtcgcgtaaaatcgccgagaagcgtgtattcccagccatcgacttc
aaccgctcaggctctcgtaaagaagacctattaaccggttcggaagagctacagaaaatg
tggattctacgcaagatcctacacccaatggatgagatcgatgcgattgagtttttgatc
gataagatggcgatgacgaagactaacgatgagttttttgacgccatgaagcgctaa
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