Klebsiella variicola 342: KPK_0458
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Entry
KPK_0458 CDS
T00772
Name
(GenBank) putative cyclic diguanylate phosphodiesterase
KO
K18765
RNase E specificity factor CsrD
Organism
kpe
Klebsiella variicola 342
Brite
KEGG Orthology (KO) [BR:
kpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpe03019
]
KPK_0458
Messenger RNA biogenesis [BR:
kpe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KPK_0458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
GDPD
Motif
Other DBs
NCBI-ProteinID:
ACI07669
UniProt:
B5XNE8
LinkDB
All DBs
Position
475074..477014
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AA seq
646 aa
AA seq
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MRLTTKFSAFITLLTSLTIFVTLIGASLSFYNGIENKVENRVQAVATMLDNRLITTSFDQ
LEPQLDELMTPLEIVHIDFMLNGKPLYSHSRTDSYRPLGSHEQFREITVPSLKHPGITLH
LVYVDPMVNYFRSLSITAPLSISIGFMVVIIFFAVRWIRRQLAGQELLELRSTRILSGER
GPQVRGSVYEWPASTSSALDMLLSELQFASDQRSRMDTLIRSYAAQDSKTGLNNRLFFDN
QLATLLEDQEKVGAYGIVMMIRLPEFDLLRDNWGRAAAEEHYFTLINLLSTFIMRYPGAL
LARYHRSDFAVLLPHRTLKEADSIAGLLLKAMDALPPTRILDRDDMMHIGICAFRSGQST
AQVMEHAEAATRNAVLQGSNSWSVYDDTLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV
TRDGRVHHRELMSRMYDGKEEVIAAEYMPMVLQFGLAEEYDRLQVTRLLPFLGFWPEENL
ALQLSVESLIRPRFQRWLRDALMQCEKSQRQRIIFELAEADVCQYIGRLQPVMRLVNALG
VRVAVVQAGLTLVGTSWIKQLDAELIKLHPGLARNIEKRSENQLLVQSLVEACKGMPMQV
FATGVRSRSEWLVLSQCGVTGGQGEFFAASQPLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaagttctcagcctttatcacgctgctaactagcctgaccatcttt
gtcacgctgattggcgcttcgctgagtttttataacggcattgagaacaaggtcgaaaac
cgggttcaggcggtggcgaccatgctggataaccggctcatcaccacctcttttgatcag
cttgagccgcagctggatgagctgatgacgccgctcgagatcgtgcatatcgatttcatg
cttaacggcaaaccactctacagccactcccgaaccgacagctaccgcccgcttggcagc
catgagcaattccgtgagatcacggtcccgtcgcttaaacaccccggtatcactctgcat
ctggtctacgttgacccaatggtgaactatttccgctcgctgtcgattacggccccgttg
tcgatctccatcggctttatggtggtgattattttcttcgccgtccgctggatccgccgc
cagctggctggtcaggagctgcttgagctgcgttccacgcgcatcctgagcggcgagcgc
gggccgcaggtgcgcggatcggtctatgaatggccagccagcaccagcagcgcgctggat
atgctgctgtcggagctgcaattcgccagcgatcagcgcagccgtatggatacgctgatt
cgctcctatgcggcacaggattctaaaacgggcctgaataaccgcctgttctttgataat
cagctggccacgctgctggaagaccaggagaaagtgggcgcctacggcatcgtcatgatg
atccgtctgccggagttcgatctgctacgggacaactggggacgggcggccgccgaagag
cattacttcacgcttatcaacctgctctctacctttattatgcgttatcccggcgcgcta
ctggcgcgctatcaccgtagcgacttcgccgtgctgctgccgcaccgcacgttaaaagag
gcagatagtatcgccgggctgttgctgaaggccatggacgcactgccgccgacgcgcatt
ctcgatcgcgacgatatgatgcatatcgggatctgtgctttccgcagcgggcaatcgaca
gcgcaggtgatggagcacgcggaagcggcaacgcgcaacgcggtgctgcagggtagcaat
agttggtcggtttacgatgacacccttcctgagaaaggtcgcggcaacgttcgctggcgg
acgctgatcgaacagatgctgagccgcgggggaccgcggttgtaccaaaaacctgccgtt
acccgcgatggccgggtgcatcaccgtgaactgatgtcgcggatgtacgacggtaaagaa
gaggtgatcgccgccgagtacatgccgatggtgctgcagtttggtctggcggaggagtat
gaccgcctgcaggtgacgcgcctgctgccatttttaggcttctggcctgaagaaaacctg
gcgttacagctgtcggtggagtcgctgatccgtccccgttttcagcgctggctgcgcgat
gccttaatgcagtgtgaaaaatcgcagcgtcagcggattatttttgaacttgcggaggca
gatgtttgtcaatatatcggccgtctgcagccggttatgcggttggttaacgccctgggc
gttcgggtggcggtcgttcaggcgggactaaccctggtgggaaccagctggatcaagcag
ctggatgcggagttgatcaaactgcatcctgggctggcgcgcaacattgaaaagcgcagt
gagaaccagctgctggtgcaaagtctggtggaagcctgcaaaggcatgcctatgcaagtt
tttgcgacgggcgtacgcagccgcagcgagtggttagtgctgtcccaatgcggtgtcaca
ggcggtcagggggaattttttgcggcctcacagccacttgacacaaatgtgaaaaaatat
tcgcaaagatactcggtttga
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