Klebsiella variicola 342: KPK_0886
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Entry
KPK_0886 CDS
T00772
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
kpe
Klebsiella variicola 342
Pathway
kpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KPK_0886 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpe03400
]
KPK_0886 (recB)
Enzymes [BR:
kpe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KPK_0886 (recB)
DNA repair and recombination proteins [BR:
kpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KPK_0886 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Ig_mannosidase
Motif
Other DBs
NCBI-ProteinID:
ACI07550
UniProt:
B5XUQ9
LinkDB
All DBs
Position
896925..900461
Genome browser
AA seq
1178 aa
AA seq
DB search
MTDTAESLDPLRLPLRGERLIEASAGTGKTFTIAALYLRLLLGLGGESAYSRAISVEELL
VVTFTEAATEELRGRIRSNIHELRIACLRGESDNPLYSALLAEIDDKDDAAKTLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESRLRYQACADFWRRHCYPLTRDIA
AVIHDVWKGPRDLLKSLDRWLQGEAPQLKSPPAPDETLAERHQQIIGRIDSLKQQWREQV
GEIEGVLENSGLDRRKYNRGNQGKWLEKVNAWAQEETLSYQLPDALEKFAQSFLLERTKA
GGEPPVHPLFSAVESLLASSLTLTDLVLARAMVEIRDAVAREKRRRGELGFDDMLSRLDE
ALRGDSGETLASAIRQRFPVAMIDEFQDTDPQQYRIFRRIWRRQPETALLLIGDPKQAIY
AFRGADIFTYMKARGDVTAHYTLDTNWRSSPGMVSSVNRLFSLSDNPFMFREIPFLPVKA
AAKNQGLRFTVDAADVPAMNVWLMPGDTVGSGDYQTFMAQLCATQIRDWLSAGQQGRALL
WRGETSRPVQASDITVLVRNRLEAAQVREALQTLGIPSVYLSNRDSVFETLEAQELLWLL
QAVLAPERENTLRSALATSMFGLTALDIENLNQDEQAWDALVEEFSDYRQIWRQRGVMPM
LRALMTARHIAENLLATRGGERRLTDILHISELLQEAASQLESEHALVRWLAQHIAEPDS
NAASQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIARFRKQDQAFYHDRETFAAVLDL
GQDEASLELAEAERLAEDLRLLYVALTRAVWHCSLGVAPLSSRKSGNSDFHLSALGRLLQ
AGEAMDAAGLAARLADFCHGDIALQRPGELDLTPWQAPAATIPPLSARELQRRIADDWRV
TSYSGLQQHGFSGGQDLLPRLDVDAAGVGEVVEEPQLTPHQFPRGAAPGTFLHSLFEELD
FTQPVPDGWMAEKLQLSGFDAQWAPVLTDWLGGVLKTRLPGADIALNQLAARDKQVEMAF
YLPIAQLLTAERLDALIRQYDPLSADTPPLDFRQVRGMLKGFIDLVFRHEGRYYLLDYKS
NWLGEDREAYTRPAMEQAMRAHRYDLQYQLYSLALHRYLRHRLADYDYDRHFGGVIYLFL
RGMDGQEGGQGIFTTRPVRPLIDGLDQLFAGETQEETS
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgctgagtctttggatcccctgcgcttgcccctgaggggcgagcgcctg
atagaagcctctgcgggcaccggaaaaacctttaccatcgccgcgctgtatctgcggctg
ctgctggggctgggcggcgagtccgcctattcccgcgctatcagcgttgaagagctgctg
gtggtgacctttaccgaggcggcgaccgaagagctgcgcgggcgtatccgcagcaacatc
cacgaactgcgcatcgcctgcctgcgcggcgaatccgacaatccgctctacagcgcgctg
ctggcggagatcgatgataaagacgacgccgcgaagacgctgctgctggctgaacggcag
atggacgaggcggcggtattcaccatccacggcttttgccaacggatgctgagccttaac
gccttcgagtcgggcatgctgttcgagcagcaactgatcgaggatgaatcccgcctgcgc
tatcaggcctgcgctgacttctggcgccgccactgctatccgctgacccgcgatatcgcg
gcggtgatccacgacgtctggaaagggccgcgcgatctgctgaagtctcttgaccgctgg
ctgcagggcgaagcgccgcagcttaagtcgccgccggcccccgacgagacgctggctgaa
cgccatcagcagatcatcggccgcattgactcgctcaagcagcagtggcgcgagcaggtg
ggcgagatcgaaggcgtgctggaaaattccgggctcgaccggcggaaatacaatcgtggc
aaccagggcaaatggcttgagaaagtgaacgcctgggcgcaggaagagacgttaagctac
cagctgcccgacgcgctggagaaatttgcccagtcgtttctgctcgagcgcaccaaagcc
ggtggcgaaccgccggtgcacccgctgtttagcgccgtagagtcgctgctggcctcctcg
ctgacgctcaccgatctggtgctggcgagagcgatggtcgagatccgcgatgcggtcgcc
cgcgaaaagcgccgccgcggcgagctggggtttgacgatatgctcagccggcttgacgag
gcgctgcgcggcgacagcggcgagacgctggccagcgccattcgccagcgttttccggtg
gcgatgatcgacgaatttcaggacaccgacccccagcagtaccggatttttcgccgcatc
tggcgccggcagccggagacggcgctgctgctgatcggcgatccgaagcaggccatctac
gcctttcgcggcgccgatatctttacctatatgaaagcgcgcggcgacgttaccgcgcac
tacaccctcgataccaactggcgctcctcgccgggcatggtgagcagcgtcaatcggctg
ttcagcctcagcgataaccccttcatgttccgcgagatcccgtttctgccggtgaaggcg
gcggcaaagaatcaggggctgcgctttaccgttgacgcggcggacgtaccggcgatgaac
gtctggctgatgcccggcgacaccgtcgggtctggcgattatcaaacgtttatggcgcag
ctctgcgccacgcagatccgcgactggctgagcgccgggcagcaggggcgcgcgctgctg
tggcgcggggaaacctcgcgcccggtgcaggcctcggatatcaccgtgctggtgcgcaac
cggctggaggcggcgcaggtgcgtgaagcgctgcagacgctgggcatcccctcggtctac
ctctctaaccgcgacagcgtttttgagacgctggaggcccaggagctgctctggctgctg
caggcggtgctggccccggagcgggaaaataccctgcgcagcgcgctggcgacctcgatg
tttggcctgaccgcgctggatattgaaaatctcaatcaggatgagcaggcgtgggacgcg
ctggtggaggagttcagcgactaccgccagatctggcgtcagcgcggagtgatgccgatg
ctgcgggcgctgatgacggcccgacatatcgccgagaatctgctggcgacccgcggcggc
gagcggcgcttaaccgacattctgcatatcagcgaactgctgcaggaggcggccagccag
ctggaaagcgagcatgccctggtgcgctggctggcgcagcatatcgccgagccggacagc
aacgccgccagccagcagatgcgtctcgaaagcgataagcacctcgtgcaaattgtcacc
attcacaagtcaaaagggctggagtaccccctggtctggctgccgtttatcgcccggttt
cgtaaacaggaccaggcgttctaccacgatcgcgagacgttcgcggcggtactggatctg
ggccaggatgaggccagtctcgagctggcggaggcggaacggctggcggaagatctgcgc
ctgctgtacgtcgccctgacccgtgcggtctggcactgcagcctcggcgtggcgccgctc
agcagccggaaatccggcaacagcgatttccacctcagcgcgctggggcggctgttgcag
gcgggcgaagccatggacgccgccgggctggccgcgcggctggcggacttctgtcatggc
gatattgcattacagagaccgggcgagctggatctgaccccatggcaggcgcccgcggcg
accatccccccgctgtcggcgcgcgagctgcagcgccgcatcgccgacgactggcgggtg
accagctactccggactgcaacagcatggtttcagcggcgggcaggatctgctgccgcgt
ctggatgtcgatgccgccggcgtcggcgaagtcgtggaagagccgcagctgactccgcac
cagtttccgcgcggcgccgcgccggggaccttcctgcacagcctgtttgaggagctggac
ttcacccagccggtgccggacgggtggatggcggagaagctgcagctgagcgggtttgac
gcgcagtgggcgccggtgctgaccgactggctggggggcgtgctgaagactcgcctgccg
ggagcggatattgcgctcaatcagcttgcggcgcgggataaacaggtggagatggcgttt
tatctgcctatcgctcagctgctgacggcggagcgccttgacgcgcttatccgccagtac
gatcccctctccgccgacacgccaccgctggatttccgccaggtgcgtggcatgctgaag
ggctttatcgatctggtcttccgccacgaaggccgttattacctgctggattacaaatcc
aactggctgggggaagaccgcgaggcctacacccggccggcaatggagcaggcgatgcgt
gcccaccgctacgatctgcagtatcagttgtacagcctggcgctgcaccgctatctgcgc
caccggctggccgattatgactatgaccgccacttcggcggcgtgatttatcttttcctg
cgcggcatggacgggcaggagggggggcaggggatcttcaccacccggccggtgagaccg
ctgattgacggtctggatcagctttttgccggagaaactcaggaggagacctcatga
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