Klebsiella variicola 342: KPK_0887
Help
Entry
KPK_0887 CDS
T00772
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
kpe
Klebsiella variicola 342
Pathway
kpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KPK_0887 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpe03400
]
KPK_0887 (recD)
Enzymes [BR:
kpe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KPK_0887 (recD)
DNA repair and recombination proteins [BR:
kpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KPK_0887 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
NAT10_TcmA_helicase
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
AAA_28
PhoH
MukB
AAA_16
T2SSE
UvrD_C
CbiA
SRP54
TrwB_AAD_bind
DEAD
AAA
ATPase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ACI06860
UniProt:
B5XUR0
LinkDB
All DBs
Position
900458..902302
Genome browser
AA seq
614 aa
AA seq
DB search
MTFEQLLLAAVEQRLLRPLDVQFALMVAQNDPPAVMLAAALLSRDAGEGHVCLPLSRLSG
DEALSGKAGEIRDRLLAEAGAPEEWPALLLASSAVSCGDAPAPMILCGDRLYLNRMWRNE
LTVARFFNEANRVLEMDEARLASTLNALFPATGETDWQKVAAAVALTRRISVISGGPGTG
KTTTVAKLLAALIQIDDSPRCRIRLAAPTGKAAARLTESLGAALRKLPLTDAQKALIPTE
ASTLHRLLGAQPGSQRMRYHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPAHGRVIFLG
DRDQLASVEAGAVLGDICAWASSGYTAARAQELTRLTGSPVPAGEGAIAGALRDSLCLLQ
KSYRFGSHSGIGSLARAVNAGARAEVKATLRQPFDDIALHPLSTTEEYEAMLGAAQHGYE
RYLQLRRERAEPQAMLAAFSEFQLLCALREGPYGVSGVNERLEQRLNRQRAIALPRHSRW
YDGRPIMISRNDSALGLFNGDIGIALERNGELRVWFLMPDGTIKSVQPSRLPEHDTAWAM
TVHKSQGSEFEHAALILPARSVPLVTRELVYTAITRAKQRLSLYADEQVLSQAIVTRTER
RSGLAEIFAGREAP
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgactttcgaacaattactgctggcggcggtggagcagcgtctgctgcggccgctggac
gtccagtttgccctgatggtggcgcaaaacgacccgccggcggtcatgctggcggcggcc
ttgctgagccgggatgctggcgaggggcacgtttgcctgccgctgtcgcggttgagcggc
gacgaggcgctgagcggaaaagcgggggagatccgcgatcggctgctggccgaagccggc
gcgccggaggagtggcccgcgctgctgctcgcttcgtcggcggtgagctgcggcgatgct
ccggcgccgatgattttgtgcggcgaccggctctatctgaaccggatgtggcgcaacgag
ctgaccgtcgcccgcttctttaacgaagccaaccgggtgctggagatggatgaggcgcgg
ctggcgtcaacgctaaatgcgctgtttcccgccactggcgaaaccgactggcaaaaagtg
gccgcggcggtggcgctgacccgccgtatctcggtgatctccggtggtcccgggaccggg
aaaaccaccaccgtggcgaagcttctggcggcgctgatccagattgacgacagtccacgc
tgtcgtattcgcctggcggcaccgacggggaaagcggcggcgcgcctgaccgaatcgctg
ggcgcggcgctgagaaagctgccgctgaccgatgcgcagaaagcgttaattcccaccgag
gccagcacgctgcatcgtctgctgggcgcccagcccggcagccagcgcatgcgctatcac
gccggcaacccgctgcatctggatgtgctggtcgtggatgaagcctcgatgattgacctg
ccgatgatgtcgcggcttatcgacgcgctgccggcccacgggcgggtgattttcctcggc
gatcgcgaccagctggcctccgtggaagcgggggcggtgctgggggatatctgcgcctgg
gcgagctcgggctacactgccgcgcgggcgcaggagctgacccggctgaccggttcgccg
gtgccggcgggcgagggggctatcgctggcgcgctgagagacagcttgtgcctgctgcaa
aagagctatcgcttcggcagtcactccggcatcgggagcctggcgcgggcggtgaatgct
ggcgcgcgcgcggaggtgaaggccacgctgcgccagccgtttgacgatatcgcgcttcat
cccctcagcacgactgaagagtacgaggccatgctcggcgcggcccagcatggctatgaa
cgctacctgcagctgcgccgcgagcgggccgaaccgcaggccatgctggccgctttcagc
gaattccagctgctgtgcgcgctgcgcgaagggccgtacggcgtgagcggcgtcaatgag
cggctggagcagcggctcaaccgccagcgggcgatcgccctgccgcgccactcccgctgg
tatgacggccgaccgatcatgatatcgcgtaacgacagcgcgctggggctgtttaacggt
gatatcggcatagcgctggagcgcaacggcgagctgcgggtgtggttcctgatgcccgac
ggcaccatcaagtcggtgcagccgagtcgcctgccggagcatgataccgcctgggcgatg
accgtgcataaatcgcagggctccgagttcgaacatgcggcgctgatcctgccggcgcgc
agcgtcccgctggtgacccgcgaactggtctacacggcgatcacccgcgcgaaacagcga
ttgtcgctctatgccgacgagcaggtgctctcccaggccattgtgacgcgcaccgagcgg
cgcagcggcctggcggagattttcgccgggcgcgaagccccctga
DBGET
integrated database retrieval system
