Klebsiella variicola 342: KPK_1972
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Entry
KPK_1972 CDS
T00772
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kpe
Klebsiella variicola 342
Brite
KEGG Orthology (KO) [BR:
kpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kpe03016
]
KPK_1972 (rnd)
Enzymes [BR:
kpe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KPK_1972 (rnd)
Transfer RNA biogenesis [BR:
kpe03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KPK_1972 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
ACI07801
UniProt:
B5XQ68
LinkDB
All DBs
Position
2033146..2034273
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AA seq
375 aa
AA seq
DB search
MNYQMITTDDGLRAVCEAASAASAVALDTEFVRTRTYYPQLGLLQLFDGTQVSLIDPLTI
SDWAPMRELLLNQDVTKYLHAGSEDLEVFLNAFSLMPQPLIDTQILAAFCGRPMSWGFAS
MVEEYSGVALDKSESRTDWLARPLTERQCEYAAADVWYLLPIASQLMAETDRAGWLSAAL
DECRLMQQRRQEVVDPAEAWRDIGNAWQLRTRQLGCLQLLAEWRLRKARERDLAVNFVVR
EEHLWSVARYMPTSLGELDSLGLSGSEIRFHGKTLISLVEKAQALPESALPAPLQNLIDM
PGYRKAFKDIKALVQEVSADKGVSAELLASRRQINQLLNWHWQLKTQAGEPELISGWRGE
LMAGRLKSLLNDYPR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaactatcagatgatcaccaccgacgatggcctgcgcgctgtctgcgaagcggcaagc
gcggcctccgccgtcgctctggatacggaatttgtccgtacccgtacctactatccgcag
ctgggcctgctgcagctgttcgacggcacccaggtctctctgatcgatcccttgacgatt
agcgactgggcgccgatgcgcgagctgctgctcaaccaggatgtgactaaatacctgcat
gccggcagcgaagatttagaagtcttcctcaatgcgttcagcctgatgccgcagccgctg
atcgacacccagatcctggcggcgttctgcggccgcccgatgtcctggggctttgcctct
atggtggaagagtattccggggtggcgctggataaaagtgaatcccgcaccgactggctg
gcgcgcccgctgaccgagcgtcagtgtgaatacgccgcagctgacgtctggtacctgttg
ccgatcgccagccaattaatggcggagaccgaccgcgcaggctggctgtcggcggcgctg
gacgaatgtcgtctgatgcagcagcgccgtcaggaagtggtcgacccggccgaggcctgg
cgcgacatcggcaacgcctggcagctgcgtacccgccagctgggctgcctgcagctgctg
gcagagtggcgtctgcgcaaagcgcgtgagcgcgacctggcggtgaactttgtggtgcgg
gaagagcatctgtggagcgtggcgcgctatatgcccaccagcctcggcgagctcgacagc
ctcgggttgtccggcagtgaaattcgcttccacggcaagacgttgattagcctggtcgag
aaagcccaggcgctgccggaatcggccctgccggcgccgctgcagaacctcattgacatg
ccgggttaccgcaaagcctttaaagatattaaagcgctggtgcaggaagtgagtgccgac
aagggcgtgagcgcggaactgctggcgtcgcgtcggcagatcaaccagttgctgaactgg
cactggcagttgaaaacgcaagccggtgagcctgagctgatttccggctggcgtggcgaa
ctgatggccgggcggctgaagtcgctgttaaacgactatccgcgctag
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