Klebsiella variicola 342: KPK_3151
Help
Entry
KPK_3151 CDS
T00772
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kpe
Klebsiella variicola 342
Brite
KEGG Orthology (KO) [BR:
kpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kpe03016
]
KPK_3151 (rnb)
Enzymes [BR:
kpe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
KPK_3151 (rnb)
Transfer RNA biogenesis [BR:
kpe03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KPK_3151 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
S1CSD-TOTE-2
ODP
OSR1_C
Motif
Other DBs
NCBI-ProteinID:
ACI09438
UniProt:
B5XS03
LinkDB
All DBs
Position
3208080..3210014
Genome browser
AA seq
644 aa
AA seq
DB search
MFQDNPLLAQLKQQLHSQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHSEKDRESAEPETLVEPFLTRFVGKVQKKDDRLAIVPDHPLLKDAIPCRAARGVEH
DFKQGDWAVAEMRRHPLKGDRGFYAELTQFITFSDDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLTRRDLTALDFVTIDSASTEDMDDALYVESTADGKLLLTVAIADPTAWIAEGSK
LDKAAKVRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACQMTLAADGTIEDNIEF
FAATIESKAKLAYDDVSDWLEGRGSWQPGSDAIAQQITLLKDVCQRRSEWRQTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNVHTGFD
PANTEQLAALLKTHDVHVDPTEVLTLEGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETIARPQDDATVQMAERRRLNRM
AERDVADWLYARFLNDKAGTDTRFAAEILDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGEVVYKVTDVIDVTIAEVRMETRSIIARPAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggataacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgcgcggaaggggtcgttaagggcacggaaaagggctttggcttcctcgaagtggacgct
cagaagagctacttcattccgccgccgcagatgaaaaaagtgatgcatggcgaccgtatc
gtcgcggtgatccattctgaaaaagatcgcgaaagcgccgaaccagaaaccctggttgag
ccgttcctgacccgtttcgtcggtaaagtccagaagaaagacgatcgcctcgctatcgtt
cctgaccatccgctgctgaaagatgccattccctgccgcgccgcccgtggcgttgagcat
gatttcaaacagggtgactgggccgtcgccgagatgcgccgtcatccgttaaaaggcgac
cgcgggttttacgcggagctgacccagttcatcaccttcagcgacgatcactttgtcccc
tggtgggtaaccctggcgcgccataacctcgaaaaagaagcgccggacggcgtggccacg
gaaatgctcgatgaagggctgacgcgccgcgatttaaccgctctcgacttcgtcactatc
gacagcgccagcaccgaagatatggacgatgcgttgtacgtcgaatccactgctgatggc
aaactgctgctgacggtcgccattgctgacccgaccgcctggattgccgaaggtagcaag
ctggataaggccgcaaaagtgcgcgcctttaccaactatctgccgggcttcaatattccg
atgctgccccgcgagctgtcagacgacctgtgctccctgcgcgctaacgaagtgcgcccg
gtgctggcctgccagatgactctggcggccgatggcaccatcgaagacaacatcgagttc
tttgccgccaccatcgagtcgaaagccaagctggcctatgacgatgtctctgactggctg
gaaggccgcggcagctggcagccgggcagcgacgcgatcgcgcagcaaattacactgttg
aaggacgtgtgccagcgtcgtagcgaatggcgtcagacccatgcgctggtgttcaaagac
cgtccggactaccgtttcgttcttggcgaaaaaggcgaagtgctggatatcgtcgcggaa
ccacgtcgcattgccaaccgtattgtcgaagagtcgatgatcgccgccaacatctgtgcc
gcccgggttctgcgcgacaagctcggcttcggcgtttataacgtccataccggcttcgac
ccggcgaataccgaacagctggctgcgctgctgaaaacccacgacgtgcacgtcgacccg
acggaggtgctgacgctggaagggttctgcaagctgcgccgggaactggacgcccagccg
accggattcctcgacagccgcatccgccgcttccagtcgtttgcggaaatcagcaccgag
ccgggcccgcactttggcctcggccttgaggcctatgccacctggacctcgccgatccgt
aaatatggcgacatgatcaaccaccgtctgctgaaggccatcatcaaaggcgagaccatt
gcgcgcccgcaggatgatgccaccgtacagatggcggagcgccgtcgtcttaaccggatg
gcagagcgcgacgtcgccgactggctgtatgcccgtttcctcaacgataaagccgggacc
gatacccgctttgcggcggagatcctcgacatcagccgcggcgggatgcgcgtgcgcctg
gtggacaatggcgcggtcgcctttattccggcccccttcctccacgccgttcgcgacgaa
ctggtgtgcagccaggagaacggcaccgtgcagatcaagggcgaggtggtctacaaagtg
actgacgttatcgatgtcaccatcgccgaagtccgcatggaaacccgcagcattattgcg
cgtccggcagtctga
DBGET
integrated database retrieval system
