Klebsiella variicola 342: KPK_3166
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Entry
KPK_3166 CDS
T00772
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
kpe
Klebsiella variicola 342
Brite
KEGG Orthology (KO) [BR:
kpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kpe03032
]
KPK_3166 (topA)
03400 DNA repair and recombination proteins [BR:
kpe03400
]
KPK_3166 (topA)
Enzymes [BR:
kpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KPK_3166 (topA)
DNA replication proteins [BR:
kpe03032
]
Prokaryotic type
DNA Topoisomerases
KPK_3166 (topA)
DNA repair and recombination proteins [BR:
kpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KPK_3166 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
MetOD1
LRV_FeS
DUF1722
Motif
Other DBs
NCBI-ProteinID:
ACI11847
UniProt:
B5XS18
LinkDB
All DBs
Position
complement(3221043..3223640)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKSTDSTATKGAKKPK
KDERGALVNRMGVDPWHDWNAHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIA
WHLREVIGGDEQRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEYWEVDASTTTPGGDTLPLQVTH
KDDKPFRPVSRDETMAAVSLLEKASYSVLEREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGHITYMRTDSTNLSQDALNMVRGYISDNFGKKYLPESANQYASKEN
SQEAHEAIRPSDVSVLAETLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVAAGDF
KLKARGRTLRFDGWTKVMPALRKGDEDRTLPVVKQGDRLSLVELTPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRDLMNY
DFTAQMEDRLDQVANHQAEWKEVLNHFFGDFTTQLETAEKDPEEGGMQPNPMVLTSIDCP
TCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPVVECEKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTLVRFSRKTKQQYV
ASEKEGKATGWSAFFIDGKWTEAKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgttatcgttgagtccccggcaaaagccaaaacgatcaataagtat
ctgggtaatgactacgtggtgaaatccagcgtcggtcatatccgcgatttgccgaccagt
ggatcagcttccaaaaagagcaccgactctaccgccaccaaaggggctaaaaagcctaaa
aaggacgaacgtggtgctctggttaaccgcatgggcgtggacccatggcatgactggaat
gcgcactatgaagtacttccgggtaaagaaaaggtagtttcagaactcaaacagttggcg
gaaaaagctgaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccattgcc
tggcacctgcgggaagtgatcggcggcgatgaacagcgttacagccgcgtggtgttcaat
gagatcaccaaaaacgctattcgtcaggccttcgaaaagccgggcgaactgaatatcgat
cgggttaacgcccagcaggcgcgccgctttatggaccgcgtggtgggctatatggtctcg
ccgctgctgtggaagaaaattgcccgtggtctttctgccgggcgcgtgcagtccgttgcg
gtccgcctggtggtggaacgtgagcgtgaaatcaaagccttcgtcccggaagagtactgg
gaagttgatgccagcaccaccacgccgggcggcgacacgctgcctctgcaggtgactcat
aaagacgataagccgttccgtccggtcagccgtgatgagaccatggcggcggtatcgctg
ctggaaaaagccagctacagcgtgctggagcgagaagacaagccgaccagcagcaagccg
ggcgcgccgttcatcacctccacgctgcagcaggcggccagcacccgtctcggcttcggc
gtgaaaaagaccatgatgatggctcaacgtctctatgaggcggggcacatcacctatatg
cgtaccgactccaccaacctgagtcaggacgcgctgaacatggttcgcggttatatcagc
gacaactttggcaaaaaatatctgccggagagcgctaatcagtacgccagcaaagaaaac
tcgcaggaagcgcacgaagcgattcgtccttctgatgtgagcgtgctggcggaaacgctg
aaagatatggaagccgatgcgcagaagctctatcagctgatctggcgccagtttgtcgcc
tgtcagatgacgccggcgcaatacgattccaccacgttgaccgtggcggcgggcgatttc
aaactgaaagcgcgcggtcgtaccttacgtttcgacggctggaccaaagtgatgccggcg
ctgcgcaagggcgatgaagaccggacgttgccggtggttaaacagggcgaccgcctgagc
ctggtggagctgacgcctgcgcagcactttaccaagccgccggcgcgcttcagcgaagct
tcgctggtcaaagagctggaaaaacgcggtatcggccgtccttccacctatgcttcgatc
atctcgaccattcaggatcgcggctacgtgcgggtggaaaaccgtcgtttctatgcggag
aaaatgggcgaaatcgtcaccgatcggctggaagaaaacttccgcgatctgatgaactac
gacttcaccgcgcagatggaagatcgtctcgaccaggtagccaaccaccaggccgaatgg
aaagaggtgctgaaccacttcttcggcgattttaccactcagctggagaccgcagagaaa
gatccggaagagggcggcatgcagccgaacccgatggtgcttaccagcatcgactgcccg
acctgtggacgtaaaatgggcatccgtaccgccagcaccggtgttttcctcggctgttcg
ggctatgctctgccgccgaaagagcgttgcaaaaccaccatcaacctggtgccggaaaac
gaagtcctcaacgtgctggaaggcgatgacgcggaaaccaacgcgctgcgtgccaaacgt
cgctgtcagaagtgcgggaccgcaatggacagctaccttatcgatcctaagcgtaaactg
cacgtgtgtggtaataacccgacctgtgacggctatgagattgaagagggcgagttccgc
atcaagggctatgacggtccggtagtggagtgcgagaagtgcggttctgaaatgcacctg
aaaatggggcgtttcggcaagtacatggcctgtaccaacgacgagtgtaagaatacgcgt
aagatcctgcgcaacggcgaagtggctccgccgaaggaagatccggtgccgctgccggag
ctgccgtgcgagaagtctgacgcgtactttgtgttgcgcgacggggcggcgggtgtcttc
ctggcggccaacaccttcccgaaatcacgggaaacgcgtgcgccgctggtggaagagctg
taccgcttccgcgatcgtctgccggaaaaactgcgctatctcgccgatgcgccgcagcag
gatccggaaggtaataaaacgctggtgcgctttagccgtaaaacgaaacagcagtatgtg
gcttccgaaaaagagggtaaagcgaccggctggtcagccttctttattgacggtaaatgg
actgaagccaaaaagtaa
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