Klebsiella variicola 342: KPK_3850
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Entry
KPK_3850 CDS
T00772
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
kpe
Klebsiella variicola 342
Brite
KEGG Orthology (KO) [BR:
kpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpe03400
]
KPK_3850 (phrB)
Enzymes [BR:
kpe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KPK_3850 (phrB)
DNA repair and recombination proteins [BR:
kpe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KPK_3850 (phrB)
Prokaryotic type
KPK_3850 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ACI11278
UniProt:
B5XZE6
LinkDB
All DBs
Position
complement(3894043..3895485)
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AA seq
480 aa
AA seq
DB search
MATHLVWLRTDLRIHDNLALAAACRDPQAQVLALYIATPGQWREHHLAPRQAAFIASHLH
SLHAALAERGIPLWVEEADDFTASVERLAHFCQQHQVSHLFYNYQYEFNERQRDAAVENT
LRDVICQGFDDSVLLPPGSVMTGSGEMYKVFTPFKNAFIRRLRDGLPACVAAPKPRQAPA
RQAPPLPELNYPQTPFDGLLFAADEKTALARLRAFCQQPAAEYEGQRDFPAVEGTSRLSP
CLATGVLSPRQCLHRLLTEHPAALDGGAGATWLNELIWREFYRHLMVYYPKLCKGRPFIA
WTDKVAWREDDAALQAWQRGETGFPIVDAAMRQLNATGWMHNRLRMIVASFLTKDLRLDW
RAGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDKQGVFMRRWL
PELAKVPEKALHQPWAWADKQGIKLDYPRPIVDHKQARQETLAAWEAARKGITPPPDGGS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggccacccatctggtctggttacgcacggatttacgcattcacgataacctggcgctg
gccgccgcctgccgcgatcctcaggcgcaggtgctggcgctgtatatcgccaccccgggg
cagtggcgtgagcatcacctggcgccgcggcaggccgcgtttatcgccagccatttgcac
agtctgcacgccgcgctggcggaacggggcataccgctgtgggtcgaagaggcggacgat
tttaccgccagcgtcgaacggctggcccatttctgccagcagcaccaggtcagtcacctg
ttctacaactatcagtacgaattcaatgaacgtcagcgcgatgccgccgttgagaacacc
ttgcgcgatgtcatttgccagggctttgacgacagcgtcctgttgccgcccggcagcgtc
atgaccggcagcggcgaaatgtataaagttttcacgccgtttaagaatgcgtttattcgc
cgtctgcgggacgggctcccggcgtgcgtggcggcgccgaagccgcgccaggcgcctgcc
cgccaggcgccgccgctgcctgagctcaactacccgcaaacgccgttcgatgggctgctg
tttgccgcggatgaaaaaacggcgctggcgcggctgcgcgcgttttgtcagcaaccggcg
gcggagtatgaggggcagcgtgacttccccgccgtggaagggaccagtcgcctgtcgccc
tgcctggccaccggggtgttgtcaccgcgccagtgcctgcatcgtctgctgacggaacac
cccgccgcgctggacggcggggcaggcgcaacctggcttaatgagctgatctggcgcgag
ttttaccgccatctgatggtctactatccgaaactctgtaaaggacgcccgtttatcgca
tggactgataaggtcgcctggcgtgaagatgacgccgccctgcaggcctggcagcgcggg
gagaccggctttccgatagtcgatgccgcgatgcgccagcttaacgccaccggctggatg
cataaccggttgcgcatgattgtcgccagcttcctgacgaaagatctgcgcctcgactgg
cgggcaggggagcgctacttcatgagtcaactgattgatggcgacctggcggcgaacaac
ggcggctggcagtgggcggcctcgacaggcaccgacgccgcgccctatttccgcatattt
aaccccaccacccagggcgagaagtttgataagcagggggtgtttatgcgtcgctggctg
cctgagctggcaaaggtgccggagaaggcgctgcatcagccgtgggcgtgggcggataaa
caggggatcaaactggattatccgcgcccgatagtcgatcacaaacaggcgcggcaggag
acgctggcggcctgggaggccgccagaaaaggaattactccaccgccagacggcgggtcc
tga
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