Klebsiella variicola 342: KPK_5361
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Entry
KPK_5361 CDS
T00772
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kpe
Klebsiella variicola 342
Pathway
kpe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KPK_5361 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpe03019
]
KPK_5361 (recQ)
03400 DNA repair and recombination proteins [BR:
kpe03400
]
KPK_5361 (recQ)
Enzymes [BR:
kpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KPK_5361 (recQ)
Messenger RNA biogenesis [BR:
kpe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KPK_5361 (recQ)
DNA repair and recombination proteins [BR:
kpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KPK_5361 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ACI09714
UniProt:
A0ACD7FCW0
LinkDB
All DBs
Position
complement(5426756..5428582)
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AA seq
608 aa
AA seq
DB search
MAQAEVLNQESLAKQVLQETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVP
ALVMGGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQVRLLY
IAPERLMLDNFLEHLANWNLAMLAVDEAHCISQWGHDFRPEYAALGQLRQRMPQIPFMAL
TATADDTTRRDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGI
IYCNSRSKVEDTAARLQSRGISAAAYHAGLENAVRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLMDARKAL
STIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGREQSHEHWVSVIRQLIHLG
LVTQNIAQHSALQLTEAARPVLRGEVPLQLAVPRIVALKPKAMQKSFGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQSPLTAGEMLSVNGVGTRKLERFGKEFMALIR
AHVDGDDE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtggcacaggcggaagtattaaatcaggaatcgctggcgaagcaggttttacaagagacc
ttcggctaccagcagttccgtcctggccaggaaacgattatcgagacggtgcttgagggc
cgggactgcctggtggtcatgccgaccggtggcggtaaatcgctgtgctatcaagtgccg
gcgctggtcatgggcggtttgacggtggtggtctcgccgctgatctcgctgatgaaagac
caggtcgatcaactgctggccaacggcgtggcggcggcttgtctgaactcgacgcaaagc
cgcgagcagcagcaggaggtgatggccggctgtcgcagcgggcaggttcgtctgctgtat
atcgcgccggaacggttgatgctggataactttcttgagcatctggcgaactggaacctg
gcgatgctggcggtagacgaagcgcactgtatctcccagtggggccatgacttccgtccg
gaatatgccgcgctgggccagctgcgccagcggatgccgcagatcccgtttatggcgttg
accgccaccgccgatgacaccacccgccgtgatatcgtccgtctgctcgggcttaacgat
ccgctgattcaggtcagcagcttcgatcggccgaacatccgctatatgctgatggagaaa
ttcaaaccgctcgaccagctgatgcgctacgttcaggatcagcgcggcaaatcgggcatc
atctactgcaacagccgctcgaaagtggaagataccgccgcgcgtctgcagagccgcggc
atcagcgcggcggcttaccatgctggtctggaaaacgccgttcgcgccgacgtgcaggag
aaattccagcgcgacgatctgcagatcgtggtggcgacggtggccttcgggatgggtatc
aacaagccgaacgtccgctttgtggtgcacttcgatatcccgcgcaatattgaatcctac
taccaggaaaccggccgcgccgggcgtgatggcctgccggcggaagcgatgctgttttac
gatccggcggatatggcgtggctgcgccgctgtctggaggaaaaacccgccggaccgcta
caggatatcgagcggcataagctgaatgcgatgggggcgtttgccgaagcgcaaacctgt
cgtcgtctggtgctgctgaactactttggcgaagggcgccaggagccgtgcggcaactgc
gatatctgtcttgacccaccaaagcagtacgatggcttaatggatgcgcgcaaggcgctg
tcaacgatttaccgggtgaatcaacgtttcgggatgggttacgtggtggaggtcctgcgc
ggggccaacaaccagcgcatccgtgacatgggccacgataagctgccggtttacggtatc
ggccgggagcagagtcacgagcactgggtgagcgtgatccgccaactgattcaccttggg
ctggtgacgcagaatatcgcccagcactccgcactgcagctgaccgaagccgcacgaccg
gtgctgcgcggcgaggtgccgctgcagcttgccgtaccgcgtatcgtggcgctgaagccg
aaggcgatgcagaaatcctttggcggcaattatgaccgcaagctgtttgccaagctgcgc
aaattgcgtaaagcgatcgccgacgaagagaatatcccgccatacgtggtcttcaacgac
gcgacgctgatcgagatggcggaacagtcgccactcaccgccggcgagatgctcagcgtc
aacggcgtggggacgcgtaaacttgagcgcttcggtaaagaattcatggcattgatacgc
gctcatgtcgatggtgatgatgagtag
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