KEGG   Klebsiella variicola 342: KPK_A0156
Entry
KPK_A0156         CDS       T00772                                 
Symbol
vagD
Name
(GenBank) vagD protein
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
kpe  Klebsiella variicola 342
Brite
KEGG Orthology (KO) [BR:kpe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:kpe03016]
    KPK_A0156 (vagD)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:kpe02048]
    KPK_A0156 (vagD)
Transfer RNA biogenesis [BR:kpe03016]
 Prokaryotic type
  tRNA degradation factors
   KPK_A0156 (vagD)
Prokaryotic defense system [BR:kpe02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    KPK_A0156 (vagD)
SSDB
Motif
Pfam: PIN PIN_3
Other DBs
NCBI-ProteinID: ACI12197
UniProt: B5RK78
LinkDB
Position
pKP187:complement(119339..119755)
AA seq 138 aa
MKKTWMLDTNICSFIMREQPAAVLKRLEQAVLRGDRIVVSAVTYAEMRFGATGPKASPRH
IQLVDAFCARLDAVLPWDRAAVDATTDIRVALRLAGTPIGPNDTAIAGHAIAAGAVLVTN
NVREFERVPGLVLEDWVK
NT seq 417 nt   +upstreamnt  +downstreamnt
atgaagaaaacctggatgctcgacactaacatctgctcgttcatcatgcgcgagcagccg
gcagcggtgctgaagcgcctggagcaggcggtgctgcgcggtgaccggatcgtggtctcg
gccgtgacgtatgccgagatgcgcttcggcgccaccggcccgaaggcctcgccgcgccat
attcagctggtcgacgcgttctgcgcgcgcctcgatgctgtcctgccctgggaccgcgcc
gcggtggacgccacgacggacatccgggtggcgctgcgcctcgccgggacgccgatcggc
ccgaacgacacggccatagccggccacgccatcgcggccggcgccgtcctggtgacgaac
aatgtgagagagtttgagcgggtgccgggtctggtgctggaagactgggtgaagtaa

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