Kosmotoga pacifica: IX53_01905
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Entry
IX53_01905 CDS
T03949
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
kpf
Kosmotoga pacifica
Pathway
kpf03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
kpf00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
IX53_01905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
kpf03011
]
IX53_01905
Ribosome [BR:
kpf03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
IX53_01905
Bacteria
IX53_01905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
CvfB_2nd
PCB_OB
OB_RNB
Ribonuc_L-PSP
RsgI_N
Motif
Other DBs
NCBI-ProteinID:
AKI96778
UniProt:
A0A0G2ZD88
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All DBs
Position
388751..390466
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AA seq
571 aa
AA seq
DB search
MDEVRKNNEENLSMDEIFESMDDFSMRRGSVKEAEVYSLQPDGLLVLFDGKLDGFVPESE
LVHPLKEYKIGDKIKVTILKVNEEEGRSTASEIRVFRRDALKTVENKFKNNETIQGKIVA
KVSSGYNVRLLNVIDAFLPGSHSGLRIDDEIPEESLDFKIIAFRRSRRGAPRIVVSLKEL
KEQRIKAYFDSIKEGYMITGTVESIKKFGAFVKLTNDITGLIPASEVSWDSSVRIEDVLK
LGDKIEAKVIGIDREKRKISLSLKQLQKDPWDDIEERFPVGTVHNGKVKSIVPFGFFVAL
ENGIEGLVHISEVFWGNTRKKLQEVVKVGDEVLVKVKDIDRKKRTISLSYREALGDPWDD
IESRYNVGKVVEGTVVKVLPTGVIIELEEYVSGFVPLSEVSWNFVDKIEDVVKEGDTVSV
QVISLDKENRRMRLSLKKATEDPWKRVAEELKVGDYVSGTITRTIKSGAIVLVDDYNVEA
FLPVSQVSDKKVENIEDAINPGLKQNFKIIRLVYEPENDSRNMVVSIRQYLKDIEKRETE
EALKELSSEDTSTLSLGDKLKEHLEKEDTSE
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagtaagaaagaacaatgaggaaaacctcagcatggatgagatttttgagagt
atggacgatttttctatgagaagggggagcgtcaaagaagcagaggtttattcattacag
cctgatgggcttcttgtcctgtttgacggaaaactcgatggatttgtaccagagtccgaa
cttgtgcaccctctcaaagaatacaaaatcggggataagataaaagtcaccatactgaag
gtcaatgaagaagagggaaggagtaccgcctcagagatcagggtctttcgaagagatgcc
cttaaaacagtggagaataaattcaagaacaacgaaaccattcagggaaagattgtagca
aaggtgagcagtggttacaatgtaagactattgaacgtgatcgacgcgtttctgcctggt
tctcattcaggacttcgaatcgatgatgaaattcccgaagaatcgttagatttcaagata
atcgccttccgaagatcgagacgtggtgccccaagaatcgtcgtgtcgttaaaagaacta
aaagaacaaaggataaaagcctactttgacagcataaaagaagggtatatgattactggt
acagttgaatccatcaaaaaattcggtgctttcgtgaagttgactaatgatatcaccggt
cttatccctgcatcagaagttagctgggattcatccgtaaggatagaagatgttctcaaa
cttggagacaaaatcgaagcaaaagtgataggcatagatagagaaaaaaggaaaatatcc
ttaagcctcaaacaattacaaaaagacccatgggatgatatcgaagagcgcttccccgtg
ggaactgttcacaacggaaaagtgaaatccatcgtcccctttggattctttgttgctctt
gagaatggtatagaaggacttgttcacatttccgaagtcttctggggcaatacgagaaag
aaacttcaggaagttgtgaaagtgggagatgaagtgcttgtcaaggtgaaagacatcgat
aggaagaaacgaactatttcattgagctatcgtgaagctctcggtgacccgtgggatgac
atagaatcaagatacaatgttggaaaagttgttgaaggaacggttgtcaaagttttgccc
actggcgtgatcatcgaactcgaagaatatgtctccggttttgtaccactctcggaagtt
tcatggaatttcgttgataagattgaagatgtagtcaaagagggtgataccgtttctgtt
caggtaatatctctcgataaagaaaatcgtagaatgagattgagtcttaagaaagccacc
gaagatccatggaaaagggtagctgaagaattgaaagtcggcgattatgtttctggaaca
atcactcgtacgataaaatcaggagcaatagtacttgttgacgattacaatgtagaggcc
tttcttcctgtatctcaggtttcagacaaaaaggtcgagaatatcgaagatgctataaat
ccgggactgaagcagaattttaagataatccgcctcgtttacgaaccagaaaacgactcc
agaaatatggtggtatccataagacagtacttgaaagacatagaaaagagggaaactgaa
gaagccctcaaagagctatcttcagaagatacgagtaccctttctcttggagacaagctt
aaagaacatcttgagaaagaggatacctctgagtaa
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