KEGG   Kosmotoga pacifica: IX53_01970
Entry
IX53_01970        CDS       T03949                                 
Name
(GenBank) DNA polymerase
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
kpf  Kosmotoga pacifica
Pathway
kpf03030  DNA replication
kpf03410  Base excision repair
kpf03420  Nucleotide excision repair
kpf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:kpf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IX53_01970
   03410 Base excision repair
    IX53_01970
   03420 Nucleotide excision repair
    IX53_01970
   03440 Homologous recombination
    IX53_01970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kpf03032]
    IX53_01970
   03400 DNA repair and recombination proteins [BR:kpf03400]
    IX53_01970
Enzymes [BR:kpf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IX53_01970
DNA replication proteins [BR:kpf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     IX53_01970
DNA repair and recombination proteins [BR:kpf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     IX53_01970
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     IX53_01970
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5 HHH_2
Other DBs
NCBI-ProteinID: AKI96789
UniProt: A0A0G2ZB21
LinkDB
Position
complement(399422..402115)
AA seq 897 aa
MANRLFLFDGTAIVYRAYFAIDVSLTNSKGEPTNALFGTARMLAKFIKEKMQDGDYALFA
FDRKEATHRHKMFDEYKATRKEMPDALVSQLPWIPEMVEGFGIKFLSIPGLEADDIIATA
ATKFKDRVNEVIIVSGDKDILQLIDDGVKVLRFVTGLTDFQEYDEKKVVEVFGFPPSKLH
DYLTLVGDNSDNIPGVKGIGEKTAKDLLKKYGSIENIYSNIRQLSPALRRKLVDGKQSME
LSKKLIKLVVDADLKVSLDELKYTGPDKEKLREVFMNMEFASLIKEFGLYSNAMEERKNG
EQEYKLISSDEELRTFWEMLRKSSFVSIDFETTSLDPHQAEIVGISFSFEEGKGYYLPVG
HENAEWQPERETVISTLKEILTHPGLKIVGQNLKFDYEIMKKHGINPVVPHFDTMVGAYL
LNPDSKRFNLDDLALKYLGYRTQSFEELMKINRLGDDFSKIPPVEAARYSIEDADIALRL
YRVLSTKLYETGLDRVMEDIEMKLIPVLADLELNGIYIDADRLYELSKQYQKKLDILLSE
LFELAGENFNPNSPSQVAKILFGKLGLTPPKKTKQGAYSTSAQVLESIADEHPVVEKLLE
YRKYQKLKSTYLDTLPKLINPITGRIHASFHQTGTGTGRLSSSNPNVQNLPIKDEAGKEI
RRCIVPQRKGWKIVSADYSQIELRVLAHCSGDEQLIEAFKHEEDIHALTASRLYGITVDS
VTEEMRKVGKMVNFAIIYGVSSYGLARRLKIPSKIAENMISNYFNAYPGVRKYIHETIEG
AKAKGYVTTLFGRRREIPHFRTKNKTRIQEGERIAINTPIQGTAADIMKLAMIRVDELVK
EAGLKGFAILQVHDELVFEVPETEVKKICDILHKGMTEILELRVPLKVDISVANYWA
NT seq 2694 nt   +upstreamnt  +downstreamnt
atggctaacagacttttcctttttgacggtactgctattgtttacagggcatattttgct
attgatgtttcactgacaaattcaaagggtgagcctaccaacgctctcttcggaacggcg
agaatgctggcaaaattcatcaaagagaaaatgcaagatggagattacgctctctttgct
ttcgacagaaaagaggcaactcacagacataagatgtttgatgaatataaagccacgcga
aaggaaatgccggatgcactcgtctcccaacttccgtggattcctgaaatggtagaaggc
tttggaataaagttcctctccatccccggccttgaagcggatgacataatcgcaaccgca
gccacgaagttcaaagatagagttaatgaagtcattatagtttcgggtgataaagatatc
ctccagcttatagacgatggggttaaagtgttgcgctttgtaacgggccttacagacttt
caggaatatgatgagaagaaggttgttgaggtgtttggatttcctccttccaaattacac
gactatctcaccctggtcggtgataactcggataatatacccggagtaaaaggaataggt
gaaaagacagccaaagatcttctgaaaaaatacggctcaatagaaaacatctattccaat
atcagacaattatctcctgctttaaggagaaagctggtagatggtaagcaatcgatggag
ctttcaaaaaagctcataaaactcgtagtagatgctgatctgaaggtatcacttgacgaa
ctaaaatataccggaccggataaggaaaaactccgggaagttttcatgaatatggaattt
gcctctttgatcaaagaatttggactgtattctaatgcgatggaggagagaaaaaacgga
gaacaagagtacaaattgatttcctcggatgaagaacttcggactttttgggaaatgttg
cggaaaagttccttcgtttctattgactttgagacgacatctcttgacccacatcaggcc
gaaattgttggaatatctttttcttttgaagaagggaaaggatattatctccccgtgggg
cacgagaatgcggaatggcaacctgaacgtgaaactgttatatcaaccttgaaagagata
ctgacgcacccgggcttgaaaattgtgggacagaacctcaaattcgattatgagataatg
aaaaagcatggtattaatcccgtagttcctcattttgatacgatggtcggggcatatctg
ctcaacccggattcaaaacggttcaatcttgatgacctcgctttaaagtatctgggatat
aggacgcaatccttcgaagaacttatgaaaataaatcggctcggggacgacttctcaaaa
atcccgccagtggaagctgctcgttactctatcgaagacgccgacatagctttgcggctc
tacagggttttgtcaacaaagttatacgaaacaggtctcgatagggttatggaagatatc
gaaatgaagcttattccggttcttgcagacttagaacttaatggtatttatattgacgct
gacagactctatgaactttcaaagcagtatcaaaaaaagctagatattctcctgagtgag
ttgtttgagcttgcaggagaaaacttcaatcccaattctccttctcaagtagccaagata
ctcttcggaaagctaggccttacacctcctaagaaaacaaagcagggagcatattccacg
agtgcgcaggtactcgagtctattgctgatgaacatcccgtggttgagaagctccttgag
tacagaaagtaccaaaaattgaaatccacttacctcgatacgcttccgaagttgattaac
cccattacaggtcggatacacgctagctttcatcaaacagggacaggcaccggtaggttg
tcgagcagtaatcccaacgttcagaatctgccaataaaagatgaagccggtaaagagatc
aggcgttgcatagtcccgcaaagaaaaggatggaagatcgttagcgctgattactctcag
atagaactcagggttctcgcacattgcagcggcgacgaacaactcattgaagccttcaag
cacgaagaagatatacatgctcttacagcttcgagactctatggtataactgtagattct
gtaactgaagaaatgaggaaagtaggtaagatggtaaattttgccatcatatatggtgtt
tcttcctatggcctcgcaagaaggctaaaaataccgtcgaaaatcgccgaaaatatgatc
tctaattattttaacgcttatccaggtgtaagaaaatatatacatgaaaccattgaagga
gccaaagcaaagggctatgtaaccactcttttcggtaggagaagggagataccgcacttt
cgtacaaaaaataagacacgcatacaggaaggagagaggatcgccattaatacacccata
cagggaaccgctgctgatatcatgaaactcgcaatgattagagtagatgaacttgtcaaa
gaagcgggacttaaagggtttgcaatcttacaggtacacgacgaacttgtttttgaagtt
ccagaaacagaagtcaaaaaaatctgtgatatactccataagggtatgactgaaatcctc
gaactgagagtccctttgaaagtggatatcagtgtcgctaactattgggcgtga

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