KEGG   Kosmotoga pacifica: IX53_02090
Entry
IX53_02090        CDS       T03949                                 
Name
(GenBank) hypothetical protein
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
kpf  Kosmotoga pacifica
Pathway
kpf03030  DNA replication
kpf03430  Mismatch repair
kpf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:kpf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IX53_02090
   03430 Mismatch repair
    IX53_02090
   03440 Homologous recombination
    IX53_02090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kpf03032]
    IX53_02090
   03400 DNA repair and recombination proteins [BR:kpf03400]
    IX53_02090
Enzymes [BR:kpf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IX53_02090
DNA replication proteins [BR:kpf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     IX53_02090
DNA repair and recombination proteins [BR:kpf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     IX53_02090
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNAX_ATPase_lid RuvB_N AAA_22 AAA_5 AAA_30 AAA_19 Mg_chelatase Rep_fac_C AAA_14 Rad17 AAA_7 AAA_24 ResIII AAA_18 AAA_2 DEAD RNA_helicase AAA_16 TsaE AAA_28 DUF815 PIF1 ORC-CDC6-like KDM6_C-hel nSTAND3
Other DBs
NCBI-ProteinID: AKI96808
UniProt: A0A0G2ZDB6
LinkDB
Position
423415..424908
AA seq 497 aa
MSEVLYRKYRPRNFEEIVGQEQVKQVLKKAIAADDIAHAYIFYGPRGTGKTTTARILAKA
VNCSNKVPSERPCGVCDSCKAIDSSNYMDVIEIDAASYRGIDEVRKIRDAASYRPTMGRY
KVYIIDEFHMLTKEAFNALLKTLEEPPEHILFILATTNLEKVPETVLSRCQIFIFKPLNN
EEIINYLKRILEIERKNFDERGLELIARAAHGGMRDAVNLLQRTLVFSGAISEKVVREVL
GILPDEVVEEYLSAFCSADYDTLIKISKKMSGSGYSLETLIDQAIEKIKENISSGNASVK
SAVVTVKLLWEIARELRYSDDKGRTFETLNIIKSNELAGLYKIEASNVKPRSNVVTASNE
ERKLLEPEEKIKADDTEDDLSLLLDRLYSEGHILTWTLLSLSKKEIEEAADGVKKLKVAF
STEDSLAKAIFEEQFESINELVRTKNGWVLEFASQELRTEKGTDVLSKLPPEQQEYMKKI
ISLFDNVEIEVEEEEDG
NT seq 1494 nt   +upstreamnt  +downstreamnt
ttgtctgaagtgctgtaccggaaatacagaccccgtaatttcgaagaaattgtgggccag
gaacaagtgaagcaagtgctaaaaaaagcgatagctgctgatgatatcgcacatgcgtat
attttctatggtccacgcggtaccggaaaaaccacgacagccaggattcttgctaaggct
gttaattgttcaaacaaagtgccctctgaaaggccctgtggcgtctgtgattcgtgtaag
gcaatagatagttcaaactacatggatgttatagaaattgatgctgcgtcataccgtgga
atcgacgaagtgcgtaaaataagagatgccgcttcatacagacccactatgggaaggtat
aaagtctatattatcgatgaatttcacatgcttacaaaagaagctttcaatgctttgttg
aagacattggaggaaccaccagaacatattctatttatccttgcaacaacgaatcttgaa
aaagtgccggaaacggtcttatctcgctgtcagatcttcattttcaaacccctcaacaac
gaagagattatcaactacctcaaaaggatccttgaaattgagagaaagaactttgacgaa
aggggattggagttgattgcccgcgctgcccatggtggcatgagagatgccgtgaacctt
ttgcaaagaacacttgttttctccggggcgatcagcgaaaaagttgttagagaagttctt
ggcatacttcctgatgaagtagtggaagagtacctttctgctttttgttctgccgattac
gacactctgataaagatatccaaaaaaatgtccggatcgggctatagtcttgaaacattg
attgatcaggctattgaaaaaattaaagagaacatttcttcaggaaacgctagcgttaaa
tccgctgttgttactgtaaagcttctctgggaaattgcccgagaattgaggtattcagat
gataaaggacggacctttgaaacacttaacataataaaatcaaatgaactagctggtctt
tataaaattgaagctagcaacgtgaaaccaagaagtaatgtagtcacagcctctaacgag
gagcgtaaacttctagaacctgaggaaaagattaaagctgatgatactgaagacgatctc
tcactccttctggatagactgtactccgaaggtcatattctcacatggacactcctcagc
ctctcaaaaaaagaaatagaggaggcggcagatggagtcaagaaactcaaggttgctttt
tcaactgaagatagccttgccaaagcgatttttgaagaacaattcgaaagtattaacgaa
ctcgtaagaacaaagaatggatgggtgcttgagtttgcttctcaggaattacgaactgaa
aaggggacagatgttctttcaaaactccccccagagcaacaagaatacatgaagaagata
atatcgttattcgataacgtggaaatagaggtggaggaggaagaagatggctaa

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