Kosmotoga pacifica: IX53_02465
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Entry
IX53_02465 CDS
T03949
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
kpf
Kosmotoga pacifica
Brite
KEGG Orthology (KO) [BR:
kpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpf03400
]
IX53_02465
DNA repair and recombination proteins [BR:
kpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IX53_02465
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
Zn_ribbon_LapB
AAA_25
DnaB_C
DUF7125
nSTAND_NTPase5
AAA_16
GvpD_P-loop
nSTAND3
AAA_22
ABC_tran
ChlI
NACHT
AAA_24
SLFN-g3_helicase
Rad51
AAA_14
ATPase_2
NTPase_1
PAXNEB
AAA_5
Lon_C
GvpD_bR2
DAP3
AAA_29
RecA_N
RNA_helicase
HepII_C
AAA
AAA_19
NB-ARC
DUF7129
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AKI96872
UniProt:
A0A0G2Z5N0
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Position
505433..506749
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AA seq
438 aa
AA seq
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MRKKQAYVCDSCGYEAPAWFGRCPMCGEWNTAVKMSIETEDVSTIDTVTPRALADVLTDE
HMRFSTGMTEIDRVLGGGVVPGSVVLVSGEPGIGKSTLMLQIAALVASDKDVLYVSGEES
DRQIKLRAERLGIPEKRVSIATTGDLSFLKSLDVQRFSMIIFDSLQTLKLPEVPSLPGSV
VQVRECANYIVSLAKKTDVPIFIVGHVTKGGQIAGPKLVEHLVDTVLYFEASKTGYRFLR
TTKNRFGPSDEIAVLEMTSLGLKEISDLSTIFVEDYIPAPGNVITAVVEGSKTFLVEIQS
LVSKPLYGTPRKLSNGVPLDRILLIAAVLTRRAGIPLDSMDIYVNVAGGIQLSDPGADLA
IVASIVSSFFDESLPKGFAAFGEIGLDGSIRPVIFSDRRIDRLKNSKFSYIFSPDGGEIV
KNVKEFVKYLGGIRREPL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaaaacaggcatatgtatgcgactcttgtggatatgaagcgcctgcatggttt
gggcgctgtcctatgtgtggtgaatggaacactgcggtgaagatgtcaatcgaaacagaa
gatgtaagtactattgacactgtgacccccagagctttagctgacgtacttaccgatgaa
catatgaggttcagcaccggtatgactgaaattgaccgggtccttggcggaggggtggtg
cctggaagtgttgttttggtcagtggtgaaccgggcataggtaagtccacactcatgctt
caaatcgccgcgcttgtagctagcgataaggacgtactgtatgtatcaggcgaggaatcc
gatagacagataaaattaagagctgaaagactgggcatacccgaaaaacgggtaagcatt
gctactaccggtgatctttccttcttgaaatcactagatgttcaacgtttttctatgata
atatttgattcattacagacattgaaacttccagaagttccatcgcttcctgggagcgtg
gttcaagttagggagtgtgccaattacatcgtttcccttgcgaaaaagaccgatgtaccc
atttttatcgtcggtcatgtcacaaaagggggccaaatagccggtccaaagcttgtagaa
cacctcgtcgacactgtactttacttcgaagcaagcaaaacgggttacagattccttaga
acaaccaaaaacaggtttggcccttcggatgaaatcgctgttctagaaatgacctcattg
ggtttgaaagagataagcgatctttcaacgatatttgtagaggactatatacctgcccca
ggcaatgttatcactgcagttgtagaaggttctaaaacatttctcgtcgagattcaatcc
cttgtttcgaagccactttatggaaccccaagaaaacttagcaacggtgttccattggat
cgtatcttgctaattgctgcggtattgacccgaagagctggaattccgctcgacagcatg
gatatatatgtaaatgttgcaggcggaatccagttaagtgaccctggtgcagatctggca
attgttgcgtcaattgtctcgtccttttttgatgaatctcttccaaaaggttttgcggct
tttggagaaatcgggcttgatggttcaataagaccggtaattttttcagatagacgaatt
gatagactgaagaattcaaagttttcctatattttctctcctgatggtggggaaatcgtc
aaaaatgtcaaagaatttgtaaaatatttaggggggataaggcgtgaaccattatga
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