Kosmotoga pacifica: IX53_02845
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Entry
IX53_02845 CDS
T03949
Name
(GenBank) phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
kpf
Kosmotoga pacifica
Brite
KEGG Orthology (KO) [BR:
kpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpf03019
]
IX53_02845
Messenger RNA biogenesis [BR:
kpf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IX53_02845
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
AKI96932
UniProt:
A0A0G2Z5S7
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All DBs
Position
592567..593610
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AA seq
347 aa
AA seq
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MKLRDILGEDAKSLLNQVTGGKEMSFVSEMKPGMVVNADLKVLSKRLQEAKDGKKFLLLT
LGDRTGAIRAIDWHNAEENDTMIPIGAIVRAKGKVVVYDERLQLNLDPQKGLTLLEEGSY
DVQRFLAVTKRNVSDMFDKLLMYISDLRNDYLKKLLKIFFEEEKGFIRTFITAPAAVKVH
HAYKGGLLEHTLSVVELCEFLASKYPESIDRDLLISGAILHDIGKIKEYGIGSSGIEKTD
EGELVGHISIGLEMVSQRIEKIPDFPNNLKTELKHLVLSHHGEMDWGSPVVPKTTEAMVL
HMADNLDSKIAQFREIETREYNGTGNGWSNYDRFLNRRIYMKNRDNL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgagagacatacttggtgaagatgcaaaaagtttactgaatcaggtgaccggc
ggtaaagaaatgtcttttgtctcagagatgaaacctggcatggttgtaaatgctgatctc
aaagtactttcaaaaagacttcaggaggcaaaagatggtaagaaattccttctgttgact
ctgggtgatagaacaggagctattagagccatagattggcataatgctgaagagaatgat
acaatgattcccatcggagccattgtcagagcaaaaggcaaagtcgtggtctatgatgaa
aggttacagttgaatctagatccacagaaggggttaacacttcttgaagaaggtagttat
gatgttcaaagatttcttgcagttacaaagcgcaatgtttctgacatgttcgataaatta
ctcatgtacatcagtgatttgagaaatgattatctcaagaaactgctgaaaattttcttt
gaagaagaaaaagggtttatccggacattcataacagcgcctgctgcagtaaaggttcat
catgcgtacaaaggcggactccttgaacacacattatcagtagtcgagctatgcgagttt
ttagcctcgaaatatccagaatctatagaccgagatctgttgatttcaggagccatttta
catgacatcggcaaaattaaagaatatggtatcggaagttcaggcattgaaaagactgac
gaaggtgagctggtgggccatatatctattggtctggaaatggtaagtcaacgtatagaa
aaaataccagactttcccaataacttgaagactgaattgaaacatttagtactttcgcat
cacggcgaaatggattggggatcacctgtagtacctaaaacaacagaagctatggtactt
catatggccgacaatctggactcaaaaattgcgcaatttagagaaatagagacgcgtgaa
tacaacggtacaggaaatggatggagtaattacgatcggttcctaaacagacggatatac
atgaaaaatcgcgataacttataa
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