KEGG   Kosmotoga pacifica: IX53_02995
Entry
IX53_02995        CDS       T03949                                 
Name
(GenBank) ribonuclease
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
kpf  Kosmotoga pacifica
Pathway
kpf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kpf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    IX53_02995
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kpf03019]
    IX53_02995
Messenger RNA biogenesis [BR:kpf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     IX53_02995
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 YfbR-like HHA FtsA
Other DBs
NCBI-ProteinID: AKI96957
UniProt: A0A0G2Z5Z2
LinkDB
Position
complement(624493..626019)
AA seq 508 aa
MIIGIFIGLIIGTAITFIAIPIVTKRVKNRLEEQLKAARQDAESIKKRALEEAEHLRKKA
LIEGREELHKFREEMERELRKEREELKQWDERLSRKEDNLDRKEEVLEKMKFELESKREE
IKNLKEAAEKKLYELSELTPEEARELVIKRAEEIYEYEIAQRFKQIKDQYEEEAMKHAKW
VIVNAVQRYAADVTGDITVSTVSLPSDEMKGRIIGREGRNIRAFEKLTGADLIIDDTPEI
VVVSCFNPLRRAVAKLTLERLVEDGRIHPARIEEMYEKAKKAVYLEVKEAGQEALMKVGI
PSMHPELVKLLGRLKYRTSYGQNVLEHSIEVAQIATLMAAELGLNVDKVKRGALLHDLGK
AVDHELEGSHAIIGGEIAKRYGEKADIVNMIQYHHGETEATSPESVLIAAADAISAARPG
ARRESLDMYIKRLEKLEEIATSFSHVEKAYAIQAGRELRVIVEPDKVDDLLAEKLAADIA
RKIEEEMEYPGVVKVTVIRERRSVAYAS
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgataattgggatttttatcggattaataataggaacagcgataacattcatcgcaatc
cccatagtcaccaaaagggttaaaaacaggcttgaagaacagcttaaagctgccaggcag
gatgctgaatcgataaagaaaagggctcttgaagaggctgaacatttgaggaaaaaggct
ctcatagaaggtcgcgaagagcttcataaattcagagaagaaatggaaagagagcttcga
aaagaaagagaggaactcaagcagtgggatgagaggttgtccagaaaggaagataacctc
gatagaaaggaagaagttcttgaaaaaatgaaattcgagctcgaatcgaaacgtgaagaa
ataaaaaacctcaaagaagccgctgagaagaagttatatgaactttctgaacttacacct
gaagaagcgcgagaactcgtgatcaaaagagcggaggagatttacgaatatgagatcgcc
caacggttcaagcagataaaagaccagtacgaagaagaagctatgaaacatgcaaaatgg
gtaatagtgaacgctgttcaacgttatgctgcggatgttacaggagatattacagtgagc
acggtaagcctgccttccgatgaaatgaagggacggataattggaagggaaggaaggaat
attagagcttttgagaagctcacaggcgctgatttaatcatcgatgacacaccagaaata
gttgtggtttcctgttttaatcctctccgtagagcggtcgcaaagttgactcttgaaaga
cttgtggaagatggaagaattcatccagccaggatagaagagatgtacgaaaaagccaaa
aaggctgtctatttagaagtaaaggaagcgggtcaggaggcactgatgaaggtcggaata
ccatcaatgcaccctgaactggtaaaactgctcggtcgtcttaaatacagaacaagttat
ggacagaatgtccttgaacactcgatagaagttgcgcaaatagcgacgcttatggcggca
gagctagggctcaatgttgacaaagttaaaagaggggctctccttcacgacctaggaaaa
gccgttgaccacgaacttgaaggttctcacgcaataataggaggagaaatcgccaagcgt
tatggtgaaaaggcagatatagtaaatatgattcaataccatcacggagaaaccgaagcc
acttcacctgaaagtgtgcttatagctgccgctgatgctatttctgctgcacgtcctggc
gcaaggcgcgaatccctcgatatgtatataaaacgactggaaaaacttgaggaaatcgca
acgagtttttctcatgtagaaaaagcttacgcaattcaagcaggaagggaactgagggta
attgtggaacctgataaagtagatgatctcctggctgaaaaacttgctgcagacatcgcg
aggaaaattgaagaagaaatggaatatcccggtgtggttaaagtgacagtaatcagagaa
agaaggagcgtagcatatgccagttaa

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