Kosmotoga pacifica: IX53_04045
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Entry
IX53_04045 CDS
T03949
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
kpf
Kosmotoga pacifica
Pathway
kpf00260
Glycine, serine and threonine metabolism
kpf00460
Cyanoamino acid metabolism
kpf00630
Glyoxylate and dicarboxylate metabolism
kpf00670
One carbon pool by folate
kpf00680
Methane metabolism
kpf01100
Metabolic pathways
kpf01110
Biosynthesis of secondary metabolites
kpf01120
Microbial metabolism in diverse environments
kpf01200
Carbon metabolism
kpf01230
Biosynthesis of amino acids
kpf01240
Biosynthesis of cofactors
kpf04981
Folate transport and metabolism
Module
kpf_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
kpf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IX53_04045 (glyA)
09102 Energy metabolism
00680 Methane metabolism
IX53_04045 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IX53_04045 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
IX53_04045 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IX53_04045 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IX53_04045 (glyA)
Enzymes [BR:
kpf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
IX53_04045 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
FIST
Motif
Other DBs
NCBI-ProteinID:
AKI97124
UniProt:
A0A0G2ZC31
LinkDB
All DBs
Position
complement(866545..867825)
Genome browser
AA seq
426 aa
AA seq
DB search
MWEKLMKNDPEAFDILSKELSRQEEGIELIASENFVSAAVMEAMGSILTNKYAEGYPKKR
YYGGCKHVDLAENLARERVKKLFDAKFANVQPHSGSQANMAAYLAVAKPGDTIMGMSLSH
GGHLTHGSPVNFSGKLFNVISYGVDPVTEMIDYDVVEKLALENKPRIIIAGGSAYSRIID
FKRFREIADKVGAYLIVDMAHFAGLVAAGLYPNPVDFAHIVTSTTHKTLRGPRGGLILTN
DEELAKAIDKSVFPGTQGGPLMHVILAKAVAFGEALKDDFKEYQQNIISNAKTLARELEE
RGLRIVSGGTDTHLFLVDLNPKGVTGKAAEKALERADITVNKNTIPKETRSPFVTSGIRI
GTPAVTTRGMGRNEMGIIADLIVRILDSIEDEKGNLPQEVIEGVSREVHELTTRFPLYKD
LFRREA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaaaagcttatgaaaaacgatccagaggcttttgacattctcagcaaagaactg
agcagacaagaagaaggtatagaactcattgcatcggaaaactttgtttctgcggcggtt
atggaagcaatgggtagcatattgacaaacaaatacgctgaaggatatccgaaaaagagg
tactatgggggatgtaaacatgtagatctcgctgaaaatctggctcgtgaaagagttaag
aagctattcgacgcgaagtttgccaatgttcagccccactctggatcacaggcaaatatg
gcagcgtacctcgccgtagccaaacccggggacacgattatgggcatgtctttgagtcat
ggtgggcatctcactcacggttctccggttaacttttcgggaaagttgttcaacgtcatc
tcctacggagtagatcctgtcacagaaatgatcgattacgatgttgtggagaaacttgcc
cttgaaaacaaaccaaggattatcattgctggcgggagtgcatattccagaataatagat
ttcaaaagattcagggaaatagctgataaagtaggggcttatcttatagtggatatggcc
catttcgccggactcgttgcggctggcctctatcctaatcctgtcgatttcgcccatata
gtcacttcgacgactcataagactcttagaggtccaagaggcggactcatcctaacaaat
gacgaagagctcgctaaagctattgataagagtgtatttccgggaactcagggcggtcct
ctgatgcatgttattctggcaaaggctgtggctttcggcgaagcgctcaaggatgatttc
aaagaataccaacaaaacatcatatcaaatgctaaaacccttgcacgagagcttgaggag
agggggctgagaatcgtttctggtggcacggatacacacctctttttggtcgatctcaat
cctaagggtgtcacaggtaaagctgccgagaaggcactcgaaagggcagatataacggta
aacaagaacaccattcccaaagaaactcgctctccatttgtaacaagcggtatccgcatt
ggaacgcccgcagttaccaccagaggaatgggtagaaacgaaatgggtatcattgccgat
ttgatagtcaggatactggatagcatcgaagacgaaaagggaaaccttcctcaagaagtc
atcgaaggagtctccagagaagttcatgaactcaccactcgcttcccactttacaaagac
ctgttccgaagggaggcgtga
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