Kosmotoga pacifica: IX53_04160
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Entry
IX53_04160 CDS
T03949
Name
(GenBank) hypothetical protein
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
kpf
Kosmotoga pacifica
Brite
KEGG Orthology (KO) [BR:
kpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kpf03009
]
IX53_04160
Enzymes [BR:
kpf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
IX53_04160
Ribosome biogenesis [BR:
kpf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IX53_04160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
MTS
Methyltransf_15
Methyltransf_31
TRM5-TYW2_MTfase
Methyltransf_25
TRM
Methyltransf_11
Methyltr_RsmB-F
Methyltransf_4
Methyltrans_SAM
TehB
DNA_methylase
RrnaAD
PrmA
Motif
Other DBs
NCBI-ProteinID:
AKI97140
UniProt:
A0A0G2Z6A9
LinkDB
All DBs
Position
complement(891200..892528)
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AA seq
442 aa
AA seq
DB search
MEQKLLVEKLVAGGVSLARNDDGKVIFLTGGYPGELIRARRLNTKRDFELWEPVEILKES
PFRRRKLCGSFPSCGGCDWQDLEYQEQLKWKKIIVEEQFRRIAKIEVVIPDVVPSREKHY
RNKMEYVAFHSSGELNLGLKRKASDRPVQLDGCVLGNVPFEDLRKRFQRLLNEHSVKPYN
TKTKTGNLKHVILRKSSRDEIMAILITKKSEFLELRPIEKRIKSEIPQVNSLIHVHNSRD
DVNLRGPYRVLYGEPVLTEEIDGILYQIPPTSFFQVNTWIARKILHYVSGVLSERKHSNL
LDLFSGVGLFSLYLAESFESVLAVENSAVSVKAFESNARINQLENVRVLKENVASFLKKA
HGKYDVVFIDPPRSGVGKPITMITRLKPSILVYISCNPTTLARDISYLMRSGFRIEDIRA
FDMFPQTHHLETIVILKHPLSL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaaattactcgttgaaaagcttgtggccgggggagtttccctggcgaggaac
gacgacggaaaagttattttcctaacaggaggttatcctggagaattaataagagcaaga
agactcaatacaaaaagagacttcgaactctgggaacctgttgaaattttaaaggaatct
cctttcagaaggagaaagttgtgtggtagctttcctagctgtggcggatgcgattggcag
gatcttgagtatcaggagcaattgaaatggaaaaagataatagtcgaggaacagttcaga
cgcattgcaaaaatcgaggtcgtgatacccgatgtggttccctctcgtgaaaaacattat
agaaacaaaatggagtatgttgcatttcactcttccggagaactcaatctgggattgaaa
aggaaagcttccgatagacctgttcaacttgatggctgtgtactcggcaacgtaccattt
gaagatctgaggaagcgattccagagattattaaacgagcactctgtaaagccttacaac
actaaaacaaaaactggaaatctgaaacacgtgatattgaggaaaagcagtcgggacgaa
atcatggccatcctgataacgaaaaaaagcgagttcctggaacttcgaccaattgaaaag
cgtataaaaagcgagattccacaggtgaattcacttatacacgtccacaatagtagagac
gatgtaaaccttagaggcccctatagggtgctctatggcgaaccggtgcttacggaagaa
atcgacggtatactttatcagattccaccgacttctttttttcaggttaatacctggatt
gcgagaaagatactgcattacgttagtggggtactttcagagagaaaacattcaaactta
ctcgacctgttttcgggtgtaggcctattctctctttatctggctgaatcattcgagagt
gtccttgctgtagaaaattccgctgtttctgtaaaagcctttgaatcaaatgctcggatc
aatcaactcgaaaatgtgagagttttgaaagaaaatgttgcgagttttctcaaaaaagcc
catggaaagtatgatgttgtcttcatcgatcctccccgaagtggcgttggtaaacctata
acaatgattaccaggctaaaaccctcgatacttgtttatatctcctgtaacccaacgaca
ctcgcccgggatatcagctatcttatgagatctggtttccgcattgaagatataagggct
ttcgacatgttcccgcagactcatcatctcgaaacaatcgtgattctcaaacacccactg
agcttataa
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