Kosmotoga pacifica: IX53_04280
Help
Entry
IX53_04280 CDS
T03949
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
kpf
Kosmotoga pacifica
Brite
KEGG Orthology (KO) [BR:
kpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kpf03016
]
IX53_04280
Enzymes [BR:
kpf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
IX53_04280
Transfer RNA biogenesis [BR:
kpf03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
IX53_04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Oxidored_FMN
Motif
Other DBs
NCBI-ProteinID:
AKI97158
UniProt:
A0A0G2ZEB1
LinkDB
All DBs
Position
918255..919550
Genome browser
AA seq
431 aa
AA seq
DB search
MKIAFRTFGCQMNVNDTEIMAGILIRAGHEIVEDEEEADAVIVNTCAVREKAEKKLYGKL
GRLKALKRRKKNLIIGVAGCVAEKEGKTLLQREEVDFVFGTRSIVKIAEFVERAAKGHKF
LDMSDYLNELDWSTPKNRTSRHHAWVTIIYGCNKFCTYCIVPYTRGREKSRPINDILSEV
KALASEGYKEITYLGQNVDSYGKDRNDGTSLAGLIRETLKIQGIERIWFLTSYPNDFSDE
LIEVIASSDRVSKSIHLPIQSGSNKILKAMNRGYTREQYLDLIGRIRAKLPDASISTDVI
VGFPGETEEDYLETKSLIEEVKFERVNLAMYSPREGTVSAKYFKDDVPHEEKVRRLNELL
ELQKRINRVINNAYVGKNVEIIVEDLMKDGKLYGRTINNKIVIFDGSKELIGKKLRIRIE
TATAGPLYGVL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagctttcagaactttcgggtgccagatgaacgtcaatgacacagaaataatg
gcaggaatcctcataagagctggacacgagatcgttgaagacgaagaagaagcggatgct
gtcattgtcaacacctgcgccgtgagggagaaagccgagaagaaactgtatggcaagctc
ggtagacttaaggccctcaagagacggaagaagaacctcatcatcggtgtggctggatgt
gttgccgaaaaagagggaaagactctacttcaaagagaggaagtcgattttgttttcggg
acacgaagcattgttaaaatcgctgaatttgttgaaagggcagctaaaggacacaaattc
ctcgatatgtcagattatctgaatgagcttgactggtcaacgccaaagaatcgtaccagc
aggcaccatgcctgggtaacaatcatctatggctgcaacaaattctgtacatactgtata
gttccatacacccgcggcagagagaagagcaggcctataaacgacattttaagtgaggtc
aaagccttagccagcgaaggatacaaggaaatcacgtacctcgggcagaatgttgattct
tatggtaaagacagaaacgatggaacaagccttgcagggcttatcagagaaaccttaaaa
atccagggcatagaaagaatctggttcctgacctcatatcccaacgatttcagcgatgaa
ttgatcgaagtcatcgcttcctctgatagagtatcgaaatcaattcatttaccaatacaa
tcggggagtaacaagatcctcaaagcgatgaatcgtggctatacccgcgaacaatatctt
gatctcatcggaagaataagggcaaaattgccagatgcttctatcagtacggacgtaatc
gttggctttccaggtgaaacggaagaagattatctcgaaacgaaatcattgattgaagaa
gtcaagttcgaaagggtcaatctcgctatgtattctccgcgcgaaggaacggtctcagca
aaatacttcaaagacgatgtgccacacgaggaaaaagtgcgacgcctgaacgaactgttg
gaactccagaagagaataaaccgcgtgataaacaacgcatatgtgggaaaaaatgtggaa
atcatagtggaagacctgatgaaggatggcaagctttatggcaggacgataaacaacaag
atcgtgatttttgatggatcgaaagaactcattgggaaaaagctccgtataagaatagaa
actgctaccgccggtccgttgtatggagtattgtaa
DBGET
integrated database retrieval system
