Kosmotoga pacifica: IX53_04305
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Entry
IX53_04305 CDS
T03949
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
kpf
Kosmotoga pacifica
Pathway
kpf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IX53_04305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpf03400
]
IX53_04305
Enzymes [BR:
kpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IX53_04305
DNA repair and recombination proteins [BR:
kpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IX53_04305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
Zn_ribbon_PriA
Helicase_C
ResIII
PriA_C
ATPase_2
AAA_22
UPF0547
Zn_ribbon_6
AAA_30
Ribosomal_S27e
Motif
Other DBs
NCBI-ProteinID:
AKI97161
UniProt:
A0A0G2ZAP1
LinkDB
All DBs
Position
923360..925642
Genome browser
AA seq
760 aa
AA seq
DB search
MHYYDVAISGSPLRSVFTYHCEEELAVGQRVMVNFAGRNVVGYITGIGIKPEFKTKSILK
PLEEQIYLSEKDIELAAWTVENYLAPVGKVFDLFFPPGRLLRSRSYVIPLDPELPFSGPI
KIDEALKIFDRSQLQKLKAQRKLKVLHSYEKRVPVRKKKKVLKLPLSLKVLEKLNLTDNQ
KQIVDYLLTIEEITPQELMKSLSLKSRSSIDTLVRKGILILKEVVETEWDKWTIRAIERL
TGEQEKVKNKLLEHLNGIHYIFGLTGSGKTEVYFKVMERVLNGGKSVIYMVPEVSLTPQL
MARIRGTFPGREVRVYHSYMSPVKRQRIWLDAVNGEIDILVGTRSALWIPVQNLGLIIVD
EEHDSSFYQQTPPHYDAVEVAIKKGQLFNIPVILGSATPRVDRYHRAKAGEFKLHTLTNR
PVGELPEIEVFDLRNTRDYIIPEETFREIEKTIKAGHQTFVFVHRKGFSNYVVCVSCGNI
LKCPNCDVSLTYHKHDAVMKCHYCGYVISPPSKCESCGSGTLAARGFGTERVEHELQKRF
PELSIMRMDRETVSNPDLYEKALRKIESKEVDIIVGTKMISKGLDFPTIGLVVVVDTDRI
INLPNYDSVENAFQLISQISGRSGRGVRGRAIIQTYEPDHRVIKTALKNNYEEFYRTEIE
VRKLLKYPPFSIFIEVVVESEKEKQCRDIALKLYGDLSEKIKDGEILEPVVPAVKKLFGK
YRMKIYLKLFSKDELHNLFELLKKAPTGIDVIVNSNGGSL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
attcattattacgatgtagccatttccggttctcctttacgttcggttttcacgtatcat
tgcgaagaagaactcgctgtgggtcagcgagttatggtgaattttgccggtagaaatgtg
gtaggttatatcactggtataggaataaaacccgaattcaaaaccaaaagtatattgaaa
cctcttgaagagcaaatttatctttcagagaaagacatcgagctggcagcctggacggtg
gaaaattatctcgctcctgtcggtaaggtctttgatcttttctttccgccaggaaggctc
ttaagaagcagaagttacgttattccccttgaccccgaattacccttttccgggccaata
aaaattgatgaggcactaaaaatatttgaccgcagccaattacagaagttgaaagcgcag
agaaaattgaaagtattgcacagctacgagaagagagtacctgtgcgaaagaagaaaaaa
gttctcaaactgcccctcagtctcaaagtactggaaaagttgaaccttacagataaccag
aagcagattgtcgattacctccttacaattgaagagataaccccacaggaactcatgaag
agcctttcgctgaaaagccgctcctcaatagacaccctcgtgagaaaaggaatcctcatt
ctgaaagaagtcgtggaaacggaatgggataaatggactataagagcgatagagagactt
accggggaacaggagaaggtaaaaaataaacttcttgaacacttaaatgggattcactac
atatttggtcttaccggtagcggaaaaacagaagtatattttaaagtcatggaacgagtg
ttgaacgggggaaagtcagttatatatatggttcctgaagtgtccctcactccccagttg
atggcccgtataaggggaacatttcctggtagagaagtcagagtgtaccacagctatatg
agtccagtaaaacgccagagaatctggctggacgctgtgaatggggaaattgacatactt
gttggcacgagaagcgcgttgtggataccagtgcagaatctcggattgattattgtggat
gaagaacacgatagcagtttttatcaacaaacgccacctcactacgatgcggtggaagtc
gccatcaaaaaagggcagctctttaatattcccgtgatacttggttcagcgaccccgcgg
gtcgaccgttatcacagagcgaaggcaggagagttcaaacttcacactcttactaataga
cccgttggcgaattacctgaaatagaagtttttgatcttcgaaatacaagagattatata
ataccggaagagacattcagagagatcgaaaagactatcaaagcgggacatcagaccttt
gtgttcgttcaccgtaagggattttcgaattatgtggtatgcgtcagttgtgggaacata
cttaaatgcccaaactgtgatgtttctctcacctatcataagcacgatgcagtgatgaag
tgccattattgtggttatgtaatctccccgccttcgaagtgtgaaagctgtggatcggga
acccttgcggccagaggattcggaacggaaagagttgagcatgaactgcaaaaaagattt
cctgaactctccatcatgagaatggaccgtgagacggtatcgaaccctgatttgtacgag
aaagctctcagaaagatcgaaagcaaagaggttgatattatagttggcacgaagatgata
tcaaaaggtcttgattttccgaccatcggacttgtggttgtagtggataccgacaggata
atcaacctgccaaattatgattctgtggaaaatgctttccagctgatttcacaaatttcg
ggaaggtcaggcagaggagtgcgtggaagagccataattcagacctatgaaccagaccac
agggtgataaaaaccgctctcaagaacaattacgaggagttttacaggacggagattgaa
gtcaggaaacttctcaaatacccgcctttcagcatcttcatagaggttgtggtggagtca
gaaaaagaaaagcaatgtcgcgatattgctttaaaactatatggcgatctctcagagaaa
ataaaggatggggagattctggaacctgttgtccctgctgtcaagaagctctttggaaag
tacaggatgaaaatatacctcaaactcttcagcaaagacgaattacacaacctatttgaa
ttgttaaaaaaagctcccaccggcatcgacgtcatcgtcaacagtaacggcgggagcctt
taa
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