Kosmotoga pacifica: IX53_04545
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Entry
IX53_04545 CDS
T03949
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
kpf
Kosmotoga pacifica
Pathway
kpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IX53_04545 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpf03019
]
IX53_04545 (groEL)
03110 Chaperones and folding catalysts [BR:
kpf03110
]
IX53_04545 (groEL)
03029 Mitochondrial biogenesis [BR:
kpf03029
]
IX53_04545 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kpf04147
]
IX53_04545 (groEL)
Enzymes [BR:
kpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
IX53_04545 (groEL)
Messenger RNA biogenesis [BR:
kpf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IX53_04545 (groEL)
Chaperones and folding catalysts [BR:
kpf03110
]
Heat shock proteins
HSP60 / Chaperonin
IX53_04545 (groEL)
Mitochondrial biogenesis [BR:
kpf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
IX53_04545 (groEL)
Exosome [BR:
kpf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IX53_04545 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
IX53_04545 (groEL)
Exosomal proteins of breast cancer cells
IX53_04545 (groEL)
Exosomal proteins of colorectal cancer cells
IX53_04545 (groEL)
Exosomal proteins of bladder cancer cells
IX53_04545 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
IFT57
vATP-synt_E
REF
Motif
Other DBs
NCBI-ProteinID:
AKI97201
UniProt:
A0A0G2ZAS7
LinkDB
All DBs
Position
complement(986746..988365)
Genome browser
AA seq
539 aa
AA seq
DB search
MPKIIRFSEEARTALEKGVDAVANAVKITLGPKGRNVVLEKSWGSPTITNDGVSIAKEIE
LEDKFENLGAQLVKEVASKTNDIAGDGTTTATVLAQAMIKEGLKNVTAGANPILIKRGIE
KAVEKAVEEIRAMSKKLSSREDIAHVAAISANDPDIGELIAEAMDKVGEDGVITVEDSKT
LETYVEFVEGMQFDRGYISPYFVTDPEKMEAVIKEPYILITDKKLSAVKPIVPILEKVAQ
TGKPLVIIAEDVEGEALSTLVLNKLRGTLESIAIKAPGFGDRRKAMLQDIAILTGGTVIS
EEVGLTLENVSIEDLGTAGMVKVKKDDTIIVDGKGDPEKIKQRVGQIKAQIEQTTSDYEK
ETLQERLAKLSGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIIAGGGVALVRA
KKAVEKLLNETEDPDMKIGVQIVYKSLDMPMRQIAANAGLDGAVIVHKVLELEDTTHGYD
ALNDRFVNMFEAGIVDPVKVTRSALQNAASIAGILLTTEAAIVEKPEEKKETTPPMPEY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaataatcaggttcagtgaggaagcaaggacagctcttgaaaagggagtagac
gcggttgctaatgctgtgaaaataactctcggccccaagggtagaaacgttgtgctcgaa
aaaagttggggttctcccacaataacgaatgacggtgtttccattgctaaggaaattgaa
ctggaagataaatttgaaaatcttggtgcgcagctcgttaaagaagttgcttccaagaca
aatgacatagccggtgatggtacaacaacggccacagtcctggcccaggctatgatcaaa
gaaggactcaagaacgtaactgcgggcgcaaatccgatcctcataaagaggggtatagaa
aaggcggttgagaaagcggttgaagaaattcgcgcaatgtccaagaaactctccagccgc
gaggatatcgcccatgttgccgctatatctgcaaatgaccctgatatcggtgagctcatc
gcggaagcgatggacaaagttggtgaagatggtgtaatcacggttgaagactcgaagact
ctggagacttacgttgaatttgtcgagggtatgcagttcgatagaggctacatctctcct
tacttcgtgacggatcctgaaaagatggaagccgttatcaaggagccatacatcctcatt
accgataaaaaactctccgcggtcaagcccattgtcccgatactggaaaaagtagctcag
actggtaaacctctggttattatcgccgaagatgtcgaaggcgaggccctttctactctg
gtgctcaacaagctcagaggtactcttgaatccatagccattaaagctcctggttttggc
gataggagaaaggccatgcttcaggacattgctatcctgacgggcggtacagttatcagt
gaagaagtaggacttacccttgagaacgtttctatcgaggatctcggtactgctggcatg
gtcaaagtcaaaaaagacgacacaatcatagtcgatggaaaaggtgatcccgaaaagatc
aagcaaagagtcggacagatcaaggcacagattgaacagacaacctctgattatgaaaaa
gaaacacttcaggaaagactcgcgaaactctctggtggtgttgcagtgattaaagttggt
gctgcaacagagaccgaactcaaagaaaagaaacacagaatagaagacgccctcagcgct
acaagagcggctgtcgaagaaggaatcattgctggtggtggagttgctctcgtaagggca
aagaaagctgtggagaagctgctcaatgagactgaagatcccgacatgaagatcggtgtg
cagatcgtctacaagtctcttgacatgcccatgagacagatagccgccaatgccggtctt
gatggtgctgttatcgtccataaagtactggaacttgaagataccactcatggttatgat
gcattgaatgacaggttcgtgaatatgttcgaagctggcattgtcgatcctgtaaaggtt
accaggagtgctttgcagaatgctgcttccatcgcgggtatcctccttacaaccgaagcg
gctatcgttgaaaaacccgaggaaaagaaagaaactactccaccgatgcctgaatattga
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