Kosmotoga pacifica: IX53_05200
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Entry
IX53_05200 CDS
T03949
Name
(GenBank) hypothetical protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
kpf
Kosmotoga pacifica
Brite
KEGG Orthology (KO) [BR:
kpf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
IX53_05200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpf03019
]
IX53_05200
03009 Ribosome biogenesis [BR:
kpf03009
]
IX53_05200
03036 Chromosome and associated proteins [BR:
kpf03036
]
IX53_05200
Enzymes [BR:
kpf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
IX53_05200
Messenger RNA biogenesis [BR:
kpf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IX53_05200
Ribosome biogenesis [BR:
kpf03009
]
Eukaryotic type
90S particles
RNase
IX53_05200
Prokaryotic type
rRNA processing factors
IX53_05200
Chromosome and associated proteins [BR:
kpf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
IX53_05200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DUF3126
Motif
Other DBs
NCBI-ProteinID:
AKI97312
UniProt:
A0A0G2Z6X5
LinkDB
All DBs
Position
1107665..1108384
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AA seq
239 aa
AA seq
DB search
MNEAINERVEKFIRILEIDSIDSELLMRALCHSSFANENPELQLESNERLEFLGDAVLDL
ALADILFTEYSLNEGKMSKIRSAVASEIILSVAARELQLGEYLLLGKGEENSGGRTKDSL
LADAFEAVTAAIYLSGGLERARKFVKRMLKKYIDKALSGELVMDYKTTLQEYTQRTFGTR
PVYISRKNQQKDDFLVEVFLNGEYMGFGIGKTKKRAEQQAAKTVYERLVKGEKGEDENA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagcgataaatgaaagagtagaaaagtttattagaatacttgaaatagacagc
atagattcggagctccttatgagggctttatgtcattcttcatttgcaaacgaaaatcca
gaattgcaattggaatcaaatgaaaggctcgaatttctcggagacgctgttctcgatctt
gcccttgctgacattctcttcacggaatattccctgaatgagggaaaaatgtcgaaaata
cgttccgcagtcgccagcgaaattatactttccgtggcggcccgcgaactccaactggga
gaatatctattacttggaaaaggcgaagaaaattccggaggcagaacaaaggactcctta
ctcgccgatgcttttgaagccgtaactgcggcaatatatctgtccggtggacttgaaaga
gcgagaaagtttgtgaagaggatgctcaaaaaatatatagacaaagccttgagtggtgaa
cttgtgatggattataaaactacacttcaggagtacactcagcgaacctttggaactaga
ccggtctacatctcgaggaaaaaccagcaaaaagatgactttctggttgaggtgttttta
aacggcgaatatatgggctttggtattggaaaaactaaaaagcgtgccgaacaacaagca
gcaaaaactgtctatgaaaggcttgtaaaaggggaaaaaggagaagatgaaaatgcctga
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