Kosmotoga pacifica: IX53_07010
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Entry
IX53_07010 CDS
T03949
Name
(GenBank) exodeoxyribonuclease V
Organism
kpf
Kosmotoga pacifica
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_14
Cas_Cas4
Motif
Other DBs
NCBI-ProteinID:
AKI97609
UniProt:
A0A0G2ZDJ2
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Position
complement(1513909..1516824)
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AA seq
971 aa
AA seq
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MNIDVNRDIFISASAGTGKTYRLVSHYITIFERAFKLGEKLDVHNVVAITFTRKAAKEMK
ERVMKSIDERIIRNAPGNWLSLRARMTNAWISTIHSFCERILRESATYLGIDPGFQILSG
IRRVTLENAVVRSYFLEHMDELEPVIELAGIDATFKLLKRMLGSERNKLKVSTTISKFLE
EYEIGEKGRKTLIATALLEEHFKKITELYNEECRGGNYIDFDNLLIKTKELLQNYPSIKQ
KYSSRFKYILVDEFQDTDELQKEIMDLLHEEGENYIFFVGDAKQSIYRFRGADVTVFNRT
RNEFLSTGKLVEELDTNRRSHPDIVEFQNRLFQRIMTNDFSGKYYKAYYEKPIKALPYDS
ESKESRVRILYSEKADDSKEIAMYISKLLHEELTFRKKDGSIERRKVEPRDIAILLRQFT
KVTHYEEALEELGIPYYTVGSKEFYNRPEVAGPLAWLDIVVDPLDDKAFTRFLLSPAFGA
NLDEILKLRVAGRSFYEALMNTNDEKFKKIAELFQKHARLKHLLSPSELLEDFVSSTNYL
SKLATLKGAERMIGNVKKMLDIAKELDNIGTSLRELSATIKAFVDSAEETEVSLETEESN
SVKLLTVHKSKGLEFPVVIVADTFWKEKTSNNHFPGIFFDKDKYLLIEKKPPDDDETLQA
RLYRDELEKIYEEEKRTLYVAFSRPRDLLVISLNGKPSGIRPWSQMLSGTLFNLDNGDIV
PELEDIVEVVSPGKGVKYRLEEEVKATEEIPEIHIIRDFTSVDRIEYISPSLLTQEFEVS
IEPEAGEVNLTRNPRELGTLAHAYLEAVGLRGKLGRITLESLVSGGRVGFVDRTRFTQEE
EESVRRVLKKLTDHPLIREIERAEKVHSELKIQKKFNSYILLGILDKIYLTEDGWKIVDF
KFAYPDEKLKEKYEFQMKFYLYITRELFKSKTARLFYLKDGSVSEPITLNDSFESELLEK
IKRFGGIVNGN
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgatgtcaacagggatattttcatttccgcttcggcaggtacaggaaagaca
taccgacttgtaagccactatataacaatatttgaaagggccttcaaactcggtgaaaaa
ctcgatgttcataatgttgtcgcgatcaccttcacacgaaaagccgcgaaagagatgaaa
gaaagagttatgaaatccatagatgagagaatcattcgaaatgccccggggaattggctt
tctctgagggcaagaatgacgaacgcctggatttctaccatacattcattctgtgaaagg
atacttcgggagagtgctacttacctcgggattgatcccggttttcagattctcagcggc
ataagacgggtaactttagaaaatgccgttgtcagaagttattttctcgaacatatggac
gagttggagccggtaatcgagcttgcaggcattgatgctacgttcaaattgctcaaaaga
atgctggggagtgagcggaacaagttgaaagtttccacgaccatctcaaaatttcttgaa
gagtatgaaataggtgagaaaggcagaaaaacccttatcgccactgctttactcgaagag
catttcaaaaagataacggagctctacaatgaagagtgcaggggtggaaactacattgac
tttgacaaccttctaataaaaacaaaagaactgcttcagaactacccttcaataaagcag
aagtattccagcagattcaaatacatcctggtggacgaattccaggataccgatgaacta
caaaaagaaataatggacttacttcatgaagaaggagagaactatattttcttcgttgga
gatgcaaaacaatccatctacagattcagaggagcagacgttactgttttcaacagaacg
aggaatgaattcctttccacaggtaaactagtagaggaactggatacaaacagacgttca
catcccgatatagttgagtttcagaacagactattccagcgaattatgacaaatgacttt
tcaggaaagtattataaggcttactatgaaaaacccataaaggcacttccatatgattca
gagtcaaaagaatcgagggtacgtatcctctatagcgaaaaggcggatgattccaaagag
atagcgatgtatatttcgaaactcctccatgaagaattaacctttagaaaaaaggatgga
agtatagagcggagaaaggtagaacctcgggatatagctatcctgctcagacagtttaca
aaggtaacacattacgaagaggccctggaggagcttggaataccgtattacactgttggt
agcaaagaattttacaacagaccggaagttgcaggtcctcttgcgtggctcgatatagtg
gtagatcccctcgatgacaaagctttcacacggtttttgctttctccggcttttggtgca
aaccttgatgagatcttaaagttgagggttgcgggaagaagtttttatgaggccctcatg
aatacaaatgatgaaaaattcaaaaaaatagccgaactctttcaaaaacacgcaagactc
aaacatctgctttctcccagtgaattgctggaagatttcgttagcagcacaaactatctt
tctaagctggcaacccttaagggcgcagaacggatgatcggtaatgtgaagaagatgctc
gatatcgcgaaagaacttgacaacattgggaccagtctgagagaactatcagccactata
aaagcttttgtcgattctgcagaagaaacggaagttagccttgaaactgaagagtccaac
agtgtaaaattattgaccgttcacaaatcgaaaggtctagagtttcccgtggttatcgta
gccgataccttctggaaagaaaaaacgtccaacaatcatttccccggcatcttcttcgac
aaggataaataccttctcatcgagaaaaagccacccgacgatgatgaaacccttcaggcg
aggctttatcgtgatgaacttgaaaagatatacgaagaggaaaagagaacactgtatgtg
gccttcagcagaccccgagatctacttgtgatcagtctgaacggcaaaccgagtggtata
cgaccatggtctcagatgctttccggaacgcttttcaaccttgataatggtgacattgta
ccggagctcgaagacatcgtcgaggtagtttcaccagggaagggtgtaaaatacaggttg
gaagaggaagtgaaagccacggaagaaatccctgagattcacatcataagggatttcaca
tctgtagatcgcatcgagtacatctcaccaagccttctcactcaggaattcgaagtctcc
atcgaacctgaagccggtgaagtgaacctgactagaaatcctagagaactgggcaccctt
gcccacgcttatcttgaagctgtgggacttcgcggaaagcttggcaggataaccctcgaa
agccttgtcagcggcggaagagtgggctttgttgacagaacacgtttcactcaggaggaa
gaagagagtgtgcgaagggttctcaagaagctgacggaccaccctcttattagagagatc
gagagggcggagaaggtccacagcgagctcaaaatacagaaaaaattcaactcatatatt
ctccttggaatccttgataaaatctatctgacggaagatggttggaaaatagttgatttc
aaattcgcctatcctgatgaaaagctgaaagaaaaatatgaattccagatgaagttctac
ctgtatataaccagagaactcttcaaatcgaaaacagccaggcttttctatctgaaagat
ggaagcgtttccgaacctatcactcttaacgatagttttgaaagtgaactattagagaaa
ataaaacgttttggagggattgtgaatggaaattaa
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